Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq835 82.4 9e-11 >seq835 Length=2606919 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || |||||| | ||||| || | ||| |||| || || ||||| ||||| || Sbjct 1730644 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACT 1730585 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || ||| | || ||| Sbjct 1730584 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAAT 1730528 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||| ||||| || || ||||||||||| || | || | ||| Sbjct 1730527 GGGCCAGAAATCCTTAACAAGTATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTT 1730468 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 1730467 GCTGATGCTGAAGAGGAGCAAAGGA 1730443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595853453484000