Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq835 82.4 9e-11
>seq835
Length=2606919
Score = 82.4 bits (90), Expect = 9e-11
Identities = 143/205 (70%), Gaps = 6/205 (3%)
Strand=Plus/Minus
Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559
||||| || |||||| | ||||| || | ||| |||| || || ||||| ||||| ||
Sbjct 1730644 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCCCCAGGTTGTGGTAAGACT 1730585
Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616
| |||||||| |||| |||| | || ||| | || || ||| | || |||
Sbjct 1730584 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCCC--AAAGTGGTCAAT 1730528
Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676
|| || ||| | | ||||| ||||| || || ||||||||||| || | || | |||
Sbjct 1730527 GGGCCAGAAATCCTTAACAAGTATGTGGGAGAATCAGAAGCTAACATTCGTAAACTCTTT 1730468
Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701
|| |||||||| || |||| ||
Sbjct 1730467 GCTGATGCTGAAGAGGAGCAAAGGA 1730443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595853453484000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |