Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq2337 116 4e-21
>seq2337
Length=679044
Score = 116 bits (128), Expect = 4e-21
Identities = 109/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || ||||||||||||||||||||||| || |
Sbjct 369570 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 369629
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| || ||| || || ||| | ||||||||||| || || || |
Sbjct 369630 TGCCCCAGGCTGAGAACCAGAGCCTGGACATCAAGAAACACGTGAACTCCCTTGGGGAAA 369689
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || ||||| || |||||
Sbjct 369690 AGCTGAAGACACTCAGGCT 369708
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || ||||| ||||||||||||||||| || |||||||| || || ||||| |
Sbjct 371770 AGCTCCAAGAGAAAGGGGTCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACA 371829
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||| | |||||||| ||||| ||
Sbjct 371830 TAGAAACCTACATGACAATGAAGAT 371854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547362162822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |