Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2147 136 6e-28
seq12 136 6e-28
seq2031 123 4e-24
>seq2147
Length=952135
Score = 136 bits (150), Expect = 6e-28
Identities = 195/272 (72%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| | || || ||||| |||||||| || ||||||||||| || |
Sbjct 4251 CGCCAAGCGCCACCGCAAGGTC-CTGCGAGACAACATCCAGGGCATCACCAAGCCGGCCA 4193
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||| || || || || |||||||| |||| || || | || || ||||
Sbjct 4192 TCCGGCGCCTGGCCCGGCGGGGAGGGGTCAAGCGCATCTCCGGGCTGATTTACGAGGAGA 4133
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || ||||| | ||||| ||| ||| |||| || || || ||| || |
Sbjct 4132 CCCGGGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCGGTCACCTACACGG 4073
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||| ||||||| | || || || | || || || |
Sbjct 4072 AGCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTGTACGCGCTCAAGCGACAGG 4013
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| || | | ||||| || ||| | ||| ||
Sbjct 4012 GGCGCACCCTCTATGGCTTCGGAGGCTAAGCT 3981
>seq12
Length=508329
Score = 136 bits (150), Expect = 6e-28
Identities = 195/272 (72%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| | || || ||||| |||||||| || ||||||||||| || |
Sbjct 448342 CGCCAAGCGCCACCGCAAGGTC-CTGCGAGACAACATCCAGGGCATCACCAAGCCGGCCA 448284
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||| || || || || |||||||| |||| || || | || || ||||
Sbjct 448283 TCCGGCGCCTGGCCCGGCGGGGAGGGGTCAAGCGCATCTCCGGGCTGATTTACGAGGAGA 448224
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || ||||| | ||||| ||| ||| |||| || || || ||| || |
Sbjct 448223 CCCGGGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGACGCGGTCACCTACACGG 448164
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||| ||||||| | || || || | || || || |
Sbjct 448163 AGCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTGTACGCGCTCAAGCGACAGG 448104
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| || | | ||||| || ||| | ||| ||
Sbjct 448103 GGCGCACCCTCTATGGCTTCGGAGGCTAAGCT 448072
Score = 136 bits (150), Expect = 6e-28
Identities = 195/272 (72%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| | || || ||||| |||||||| || ||||||||||| || |
Sbjct 454726 CGCCAAGCGCCACCGCAAGGTC-CTGCGAGACAACATCCAGGGCATCACCAAGCCGGCCA 454668
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || |||||||| || || || |||||||| |||| || || | || || ||||
Sbjct 454667 TCCGGCGCCTGGCTCGGCGGGGAGGGGTCAAGCGCATCTCCGGGCTGATTTACGAGGAGA 454608
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || ||||| | ||||| ||| ||| |||| || || || ||| || |
Sbjct 454607 CCCGGGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGAGACGCGGTCACCTACACGG 454548
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||| ||||||| | || || || | || || || |
Sbjct 454547 AGCACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTGTACGCGCTCAAGCGACAGG 454488
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| || | | || || || ||| | ||| ||
Sbjct 454487 GGCGCACCCTCTACGGCTTCGGAGGCTAAGCT 454456
Score = 129 bits (142), Expect = 9e-26
Identities = 185/261 (71%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 95038 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 95097
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 95098 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 95157
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 95158 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 95217
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| ||||| ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 95218 GCACGCCAAACGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 95277
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
||| | | | || || || ||
Sbjct 95278 CCGCACGCTCTACGGCTTCGG 95298
Score = 129 bits (142), Expect = 9e-26
Identities = 185/261 (71%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 334807 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 334748
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 334747 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 334688
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 334687 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 334628
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 334627 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 334568
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
||| | | | || ||||| ||
Sbjct 334567 CCGCACGCTCTACGGTTTCGG 334547
Score = 127 bits (140), Expect = 3e-25
Identities = 192/272 (71%), Gaps = 1/272 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 300656 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 300715
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 300716 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 300775
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 300776 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 300835
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 300836 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 300895
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA-ATCT 16702
||| | | | || || || || |||| ||||
Sbjct 300896 CCGCACGCTCTACGGCTTCGGTGGTTAGATCT 300927
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 203333 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 203274
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 203273 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 203214
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 203213 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 203154
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 203153 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 203094
Query 16672 CCG 16674
|||
Sbjct 203093 CCG 203091
Score = 123 bits (136), Expect = 4e-24
Identities = 184/261 (70%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 323274 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 323215
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 323214 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 323155
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 323154 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 323095
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 323094 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 323035
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
||| | | | || || || ||
Sbjct 323034 CCGCACGCTCTACGGCTTCGG 323014
Score = 123 bits (136), Expect = 4e-24
Identities = 184/261 (70%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 400701 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 400642
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 400641 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 400582
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 400581 CCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 400522
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 400521 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 400462
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
||| | | | || || || ||
Sbjct 400461 CCGCACGCTCTACGGCTTCGG 400441
Score = 122 bits (134), Expect = 1e-23
Identities = 175/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| | | || || || |||||||| || ||||||||||| || |
Sbjct 356460 CGCCAAGCGCCACCGCA-AGGTGTTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 356518
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 356519 TCCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGA 356578
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || |
Sbjct 356579 CCCGCGGGGTGCTCAAGGTCTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGG 356638
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||| ||||||| | || || || | || || || |
Sbjct 356639 AGCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGG 356698
Query 16671 GCCG 16674
||||
Sbjct 356699 GCCG 356702
>seq2031
Length=1166631
Score = 123 bits (136), Expect = 4e-24
Identities = 184/261 (70%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 1160322 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 1160263
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 1160262 CCGGCGCCTGGCGCGGCGCGGCGGCGTCAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 1160203
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| ||||||| ||| ||| |||| || || || ||| || ||
Sbjct 1160202 CCGCGGGGTGCTCAAGGTCTTCCTAGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 1160143
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | || || || | || || || ||
Sbjct 1160142 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGGG 1160083
Query 16672 CCGTAAGATTTATGGTTTTGG 16692
||| | | | || || || ||
Sbjct 1160082 CCGCACGCTCTACGGCTTCGG 1160062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072923375570
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