Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1841 96.9 9e-15
seq654 87.8 5e-12
>seq1841
Length=1603521
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| |||||||| || || |||| |||||||| || || || |||
Sbjct 624317 GCTCAGCAGCTTTGGTACGCCATCATTGAGTCTCAGACCGAGACAGGTACCCCATACATG 624258
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| ||||||||| |||| || ||||| |
Sbjct 624257 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAAAACCTGGGAACAATCAAATGC 624198
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| ||||| || || | || || |||
Sbjct 624197 AGCAACCTGTGTACAGAAATAGTAGAGTATACC 624165
Score = 95.1 bits (104), Expect = 3e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
||||| |||||||| || || |||||| ||| ||||| |||||||||||||| |
Sbjct 625679 GGGGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGATATCTTTGAGTTTCTTGATTTA 625620
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
||| ||||| |||||||| ||| ||| || | || || |||| ||| |||||| ||
Sbjct 625619 AAGAAGAACACAGGAAAAGAAGAACAGCGCGCCAGGGACCTTTTCTTTGCCCTTTGGATT 625560
Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984
| || | || ||||| || ||||||
Sbjct 625559 CCGGATCTCTTCATGAAACGAGTGGAG 625533
>seq654
Length=93227
Score = 87.8 bits (96), Expect = 5e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||| || | || ||||||| || ||||| || ||||||||||| | ||| |
Sbjct 53914 GAACGTGTTGTCGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCG 53973
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| || ||||| || ||||| | | | ||||| || || || ||||| ||||| | |||
Sbjct 53974 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTTATT 54033
Query 22609 AGCCGAGATGAGG 22621
||| |||||||||
Sbjct 54034 AGCAGAGATGAGG 54046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303312018947180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |