Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2363 86.0 5e-12
seq1424 84.2 2e-11
>seq2363
Length=646923
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| | || || ||| ||| |
Sbjct 187679 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGC 187738
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | ||||| ||||| ||||| |||||||| || || || ||
Sbjct 187739 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAG 187798
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| ||||| | | ||| ||||| || ||||| | | | | | | ||| || |||
Sbjct 187799 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAAC 187858
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || || || || || | || | || | | |||||||||||
Sbjct 187859 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTTCGCTTGAGAGGAGG 187905
>seq1424
Length=2309046
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|||||||||| | || || || || | || || || | || ||| | ||||| || |
Sbjct 23670 CAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACC 23611
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| |||||||||||| | || || ||||| || || |||||||| ||||| ||
Sbjct 23610 CAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGA 23551
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|| ||||| || || | | |||||||| || ||||||| | | | | |||||
Sbjct 23550 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 23491
Query 24167 TAACATTCAAAAAGAATCTAC 24187
|||||||| || || || ||
Sbjct 23490 CAACATTCAGAAGGAGTCGAC 23470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429922952785950
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |