Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq1767 91.5 1e-13
seq1689 86.0 5e-12
seq1424 82.4 6e-11
>seq1767
Length=1785757
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || |||||||| |||||| || | ||| | ||||||||| |||
Sbjct 523922 GATAAGGAAGGAATTCCTCCTGATCAGCGAAGACTGATCTTTGCTGACAAACAATTGGAA 523863
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| ||| || | || || ||||||||||| ||||||||| | ||| | ||||||
Sbjct 523862 GATGGATGTACCTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 523803
Query 115499 AGA 115501
|||
Sbjct 523802 AGA 523800
>seq1689
Length=2064527
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 115380 ATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAG 115439
|||| ||||| | || | ||||||||||||| || | ||| ||||| ||| | ||||
Sbjct 174877 ATAAGGAAGGAATTCCTCCTCATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAG 174818
Query 115440 ATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGA 115499
||| | ||| || | ||||| | ||||||||| ||||| ||| | ||| | |||||||
Sbjct 174817 ATGGACATACCTTGTCTGATTACAGCATTCAAAAGGAGTCCACTCTTCATCTCGTGTTGA 174758
Query 115500 GA 115501
||
Sbjct 174757 GA 174756
>seq1424
Length=2309046
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
||||||||||| || || || || || || || || ||||| ||| | ||| ||| ||
Sbjct 23669 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCC 23610
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| ||||| | | | ||||| || || ||||| |||||| |||| ||
Sbjct 23609 AGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGAC 23550
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| || || || | ||| ||||| || | ||||||| | || | | |||||
Sbjct 23549 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 23490
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||| || | ||| |||| || | || |||| ||
Sbjct 23489 AACATTCAGAAGGAGTCGACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 23440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425331092138800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |