Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 120 3e-22
>seq1424
Length=2309046
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065
||||||| | || ||| || || | ||| | ||||||||| || ||||||||||||||
Sbjct 22754 AGCCACCCCTCAGACGTAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAG 22813
Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||||| ||||| ||||| |||||||| |||| | | ||||||||| ||||
Sbjct 22814 AAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAG 22873
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| ||||| || || ||| || ||| | | ||| | || || ||| || |
Sbjct 22874 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCA 22933
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || || || ||||||||||||||
Sbjct 22934 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | |||||||||||| ||||||||||||||
Sbjct 23440 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAA 23499
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || |||||||||||||| |||| | | ||||||||| ||||||
Sbjct 23500 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 23559
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | ||| | || || ||| || |
Sbjct 23560 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACT 23619
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || || || ||||| || |||||
Sbjct 23620 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 23666
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | || |||||| || | ||| | |||||||||||| ||||||||||||||
Sbjct 23212 CCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAA 23271
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||| |||||||| |||| | | ||||||||| || |||
Sbjct 23272 AGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 23331
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | ||| | || || | | ||| |
Sbjct 23332 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACC 23391
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || || || ||||| ||||||||
Sbjct 23392 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23438
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | || |||||| || | ||| | ||||||||| || ||||||||||| ||
Sbjct 22984 CCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAA 23043
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||| |||||||| |||| | | ||||||||| |||||
Sbjct 23044 AGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGA 23103
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | ||| | || || ||| || |
Sbjct 23104 ATACCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 23163
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || || || ||||| ||||||||
Sbjct 23164 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471998108601600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |