Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1841 140 4e-28
seq654 114 2e-20
seq1669 98.7 1e-15
>seq1841
Length=1603521
Score = 140 bits (154), Expect = 4e-28
Identities = 113/137 (82%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251
|| ||||||||||| ||||| ||||| |||||||| || || |||||||| ||||| |
Sbjct 610003 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTATATGGTTCAATG 610062
Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
|||||||||||||| | ||| ||||||||||| ||||| |||||||| || | | ||||
Sbjct 610063 GACTCATTATTTCCAAGAATCTGAGCAGTTGAAGCAGTAGGCATAGGGGCAATAAGTAAA 610122
Query 62312 CTATTTCTAAGACCGTA 62328
|||||||| | ||| ||
Sbjct 610123 CTATTTCTTATACCATA 610139
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126
|| |||||||||||| |||||||| ||||||||||| || | || || || |||| |
Sbjct 625533 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCGCG 625592
Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186
||||| || |||||||| ||||| || | ||| || ||| | | ||||| |||||||
Sbjct 625593 CTGTTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATATCTAAATGCCA 625652
Query 63187 CGGTTCCAAGTATATGGC 63204
|| |||| ||| || ||
Sbjct 625653 AGGCTCCAGGTAAATAGC 625670
Score = 96.9 bits (106), Expect = 4e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491
|| || || ||||| || | || || || | ||||| || || || || || || |||
Sbjct 620899 TAGGTTTCATATGGGCCATGCTCCTTGGCCAAATCACAGCTGGCTTCCAAGGCTCCATAA 620958
Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551
||||||||||| ||||| | |||||| | || || || | || ||||| |||||
Sbjct 620959 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 621018
Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611
| | |||||||| |||||||| | ||||| || ||||| ||||| || | ||| |
Sbjct 621019 CTCATCAGAATAAAAGCGTCTGCCAGACCTTGTACCCCAATTCCGATGGGGCGATGGCGT 621078
Query 62612 TTATTAGA 62619
||||| ||
Sbjct 621079 TTATTTGA 621086
Score = 96.9 bits (106), Expect = 4e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| || | ||| |||||||||||||| | || || || || | || || || ||||
Sbjct 636388 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAACCCTTGCTGCCAGAA 636447
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
||||||| || || || | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 636448 TGGCATAGTCGGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 636507
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975
||| || || || || ||| | |||| |||||||| || |||||
Sbjct 636508 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 636553
>seq654
Length=93227
Score = 114 bits (126), Expect = 2e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 54046 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCT 53987
Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802
| ||||| ||||| || ||||| || ||||||||||| |||||||| ||||| ||||| |
Sbjct 53986 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 53927
Query 32803 C 32803
|
Sbjct 53926 C 53926
Score = 96.9 bits (106), Expect = 4e-15
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980
|||||||| || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 53115 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 53056
Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026
||||| || |||||||| || | || || || ||||| ||||||
Sbjct 53055 AATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTCT 53010
>seq1669
Length=5184857
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744
|| ||||| || || | ||| |||||||| |||||||| ||||| || || | || ||
Sbjct 4063058 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCTTT 4062999
Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803
| ||| ||||| | ||||| ||||| || |||||||||||||| || || ||||||||
Sbjct 4062998 AACCAGAATATAGCAGCAAAGGATCCCGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 4062940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633612278204000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |