Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1424 89.7 4e-13 >seq1424 Length=2309046 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 21824 ATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAAC 21883 |||| |||||||||||| || | || || | || ||||| ||||| ||| ||||| Sbjct 23676 ATAGGTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGT 23617 Query 21884 GGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACC 21943 |||| || || || | | || | ||| || || ||||| || || | || Sbjct 23616 GGAACCCAGTGACACCATCGAGAATGTAAAGGCCAAGATCCAGGATAAGGAAGGCATCCC 23557 Query 21944 TGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGC 22003 | | |||| ||||| || |||||||| ||||| || || |||||| ||| | | Sbjct 23556 TCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTC 23497 Query 22004 CGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| ||||||||||| || || || ||| |||| | ||| | |||| || Sbjct 23496 TGATTACAACATTCAGAAGGAGTCGACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 23440 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | || || | || ||||| ||||| ||| ||||| |||| || Sbjct 22982 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 22923 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || || ||||| || || | ||| | |||| Sbjct 22922 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAG 22863 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||||||||| |||||||| || || ||| ||| | | |||||||| Sbjct 22862 CAGAGGCTTATCTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTTTCTGATTACAAC 22803 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAAT 22068 |||||||| || || || || ||| |||| ||||| | | || || | ||||| Sbjct 22802 ATTCAGAAAGAGTCGACCCTGCATCTGGTCCTACGTCTGAGGGGTGGCTGTTAAT 22748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358113932031460