Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1669 87.8 3e-12 >seq1669 Length=5184857 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || ||||||||||| |||| || Sbjct 4062925 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCGGGATCCTTTGCT 4062984 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||| | ||| | | |||| | ||||| |||||||| || || || ||||| Sbjct 4062985 GCTATATTCTGGTTAAAGAAAAGAGGTCT-TATGCCTGGACTCACTTTTTCCAATGAACT 4063043 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 4063044 CATCAGCAGAGATGA 4063058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944309807442400