Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1960 87.8 2e-12
>seq1960
Length=1325267
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329
|||||||| |||||||||| || || || | || ||||||||| | || ||||| |||
Sbjct 896351 AGGGAATATTTGGCAATGTTGAAGGGCACACTCAGGCCCATGTCTGCTGATCTCTGGTAC 896410
Query 20330 AGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGA 20389
||||| ||||| ||||||| || | ||| | | || || | |||||| | ||
Sbjct 896411 AGCTGGCAGGACAGCTCACTGTTCACCACACAGAGCTGGCAAAGGGCATGACAGAGAGGC 896470
Query 20390 AGCGCCAT-CAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTG 20448
|| ||||| | | || || || || ||||| | ||||| ||||||||||| || |
Sbjct 896471 AGGGCCATGCGAGGAAAA-TCTTTTGGATTCCAAGAACACAGGATGATTCTTCTGTCATT 896529
Query 20449 CGGATTATTTTTTAT 20463
|| || |||| ||
Sbjct 896530 GGGGTTGGTTTTGAT 896544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441359062271600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |