Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq2337 93.3 5e-14
>seq2337
Length=679044
Score = 93.3 bits (102), Expect = 5e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| |||| || |||||||| || ||||||||||| || |
Sbjct 369570 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 369629
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| |||||||| |||||| || || ||| | || || || || | || ||||
Sbjct 369630 TGCCCCAGGCTGAGAACCAGAGCCTGGACATCAAGAAACACGTGAACTCCCTTGGGGAAA 369689
Query 9981 ATCTAAAGACCCTACGGCT 9999
| || ||||| || ||||
Sbjct 369690 AGCTGAAGACACTCAGGCT 369708
Score = 86.0 bits (94), Expect = 7e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || ||||| | |||||||||||||| || |||||||| || || |||||||
Sbjct 371770 AGCTCCAAGAGAAAGGGGTCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACA 371829
Query 10140 TAGAAGCATACATGACAATTAA 10161
||||| | ||||||||||| ||
Sbjct 371830 TAGAAACCTACATGACAATGAA 371851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552699596689600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |