Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 86.0 5e-12
>seq1424
Length=2309046
Score = 86.0 bits (94), Expect = 5e-12
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||||||| ||||| |||||||| || || ||||||||||||||||||||| |
Sbjct 23439 ACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGA 23498
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || | || |||| |||||||| ||||| || || | |||||| || |
Sbjct 23499 AAGAGTG-CGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAG 23557
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCG 34077
| | || || || ||| || || ||| | ||| | | ||| | | |||
Sbjct 23558 GGATGCCTTCCTTATCCTGGATCTTGGCCTTTA-CATTCTCGATGGTGTCACTGGGTTCC 23616
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130
||| | || || || || ||||| || || ||||| ||||||||||||||
Sbjct 23617 ACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397050350396980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |