Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 123 6e-23
seq557 111 4e-19
seq54 107 5e-18
seq2256 95.1 3e-14
seq1767 95.1 3e-14
seq1935 84.2 5e-11
seq446 84.2 5e-11
>seq1424
Length=2309046
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || || || ||||| | || ||||| || || || | ||||| ||||| |||
Sbjct 23020 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 23079
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | || || ||||| ||||||||||| || || ||||| ||
Sbjct 23080 ATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGCCTTCACATTC 23139
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||| ||||| || ||||| ||||| |||||||| ||||| |||
Sbjct 23140 TCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 23199
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 23200 AAGATCTGCAT 23210
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| || || || || || | || ||||| || || || | ||||| ||||| |||
Sbjct 22792 TCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 22851
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || ||||| ||| ||||| ||||||||||| || || |||||
Sbjct 22852 ATAAGCCTCTGCTGG---TCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 22908
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | ||| ||||| || ||||| ||||| |||||||| |||||
Sbjct 22909 TTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 22968
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 22969 ACGAAAATCTGCAT 22982
Score = 111 bits (122), Expect = 4e-19
Identities = 144/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || || || | || ||||| || ||||| | || || ||||| |||
Sbjct 23476 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 23535
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || ||||| ||| ||||| ||||||||||| || || || ||
Sbjct 23536 ATGAGCCTCTGCTGG---TCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTTACA 23592
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | ||| ||||| || ||||| ||||| |||||||| |||||
Sbjct 23593 TTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 23652
Query 288460 ACGAATATCTGCATTATG 288477
||||| || |||||| ||
Sbjct 23653 ACGAAGATTTGCATTTTG 23670
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || || || | || ||||| || || || | ||||| ||||| |||
Sbjct 23248 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 23307
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || |||||| || ||||| ||||||||||| || || |||||
Sbjct 23308 ATGAGCCTCTGCTGG---TCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 23364
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || | || || || || ||||| ||||| |||||||| |||||
Sbjct 23365 TTCTCAATGGTGTCACTTGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 23424
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 23425 ACGAAGATCTGCAT 23438
>seq557
Length=6002282
Score = 111 bits (122), Expect = 4e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| | |||||||||||| | ||| ||| | || | || | ||||| || || ||
Sbjct 132970 TCTTTCTAGATATTATAGTCTGAGAGTGTGAGGCCATTCTCCACATGTTTGCCCGCAAAA 132911
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA-TTTTCGCTTTCACGTT 288401
||||||||||| | | | || ||| ||||| || || |||| |||| ||||| || ||
Sbjct 132910 ATCAGACGCTGCTAGGCAGGTGAGATGCCTTCCTTGTCTTGGATTTTTAGCTTTGACATT 132851
Query 288402 TTCTA-TAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
||| | | || || | | |||||||| ||||| ||||| || ||||| ||||| |
Sbjct 132850 TTCAAGGATTGTCACTGGGCTTAACTTCGAGTGTGATGGTCTTGCCAGTCAGGGTCTTCA 132791
Query 288461 CGAATATCTGCAT 288473
|||| ||||||||
Sbjct 132790 CGAAGATCTGCAT 132778
>seq54
Length=460634
Score = 107 bits (118), Expect = 5e-18
Identities = 139/191 (73%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|||||||| ||||||||||| | ||| |||| || | || | ||||| || | |||
Sbjct 180509 TCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCAGCTGTTTGCCCACAAAG 180450
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| || | ||| || || || || || |||||||| ||||| || |||
Sbjct 180449 ATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTT 180390
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | | || | ||| ||||| ||||| || ||||| ||||| ||
Sbjct 180389 TCGATGGTGTCACT-GGCTGGACCTTGAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACA 180331
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 180330 AAGATCTGCAT 180320
>seq2256
Length=771247
Score = 95.1 bits (104), Expect = 3e-14
Identities = 135/187 (72%), Gaps = 6/187 (3%)
Strand=Plus/Minus
Query 288291 GATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACG 288350
|||||| ||||| | ||| ||||| | ||||| | |||| || || || ||||||||
Sbjct 650809 GATATTTTAGTCTGAGAGAGTGCGGCTATCTTCCAGCCGTTTGCCCGCAAAAATCAGACG 650750
Query 288351 CTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGA 288410
||| || | |||||| || || || || |||||||| ||||| | |||||| | |
Sbjct 650749 CTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGATGTTTTCAGTGGT 650690
Query 288411 ATCGCTCGATTCTACTTCGAGCGTGATCGTCT--TCCC--GGTCAGAGTCTTGACGAATA 288466
|| || | || || || | ||||| |||| |||| |||||| ||||| || || |
Sbjct 650689 GTCACTGGGCTCGACCTC--GTGTGATGGTCTTGTCCCAAGGTCAGGGTCTTCACAAAGA 650632
Query 288467 TCTGCAT 288473
|||||||
Sbjct 650631 TCTGCAT 650625
>seq1767
Length=1785757
Score = 95.1 bits (104), Expect = 3e-14
Identities = 155/221 (70%), Gaps = 7/221 (3%)
Strand=Plus/Plus
Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315
||||| | || ||||||| || || ||||| || || ||||| | | || | |
Sbjct 523798 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACAT 523857
Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCT 288372
|| ||||| |||||||| | || |||||||| | |||| | || | || ||||||
Sbjct 523858 CCATCTTCCAATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGA---GGAATTCCT 523914
Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432
|| ||||||||||| || || || || |||||||| | | | | ||| || || ||
Sbjct 523915 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGA 523974
Query 288433 GTGATCGTCTTCCC-GGTCAGAGTCTTGACGAATATCTGCA 288472
|||| |||||||| | | || || || ||||| |||| ||
Sbjct 523975 GTGAAGGTCTTCCCTGTTAAGGGTTTTCACGAAAATCTCCA 524015
>seq1935
Length=6884337
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/191 (70%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|||||||||||||| || || | ||| ||||| || || || | ||||| || || ||
Sbjct 3241611 TCTTTTTGGATATTGTACTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAA 3241670
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | | | |||| || || | || |||||||| ||||| | ||
Sbjct 3241671 ATCAGACGCTGCTG-GCAGGTAGGATGCCCTCCTCGTCTTGGATTTTAGCTTTGCCATTC 3241729
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| | | ||| || | | || || | ||||| |||| | |||||| || | ||
Sbjct 3241730 TCAGTGGTATCACTGGGCTTGACCGCGTGTGTGATGGTCTCGCGGGTCAGGGTTATCACA 3241789
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 3241790 AAGATTTGCAT 3241800
>seq446
Length=6116713
Score = 84.2 bits (92), Expect = 5e-11
Identities = 129/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 288290 GGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC 288349
||||||||||||| | || |||| | | || | ||||| ||||| || || ||||
Sbjct 3276547 GGATATTATAGTCTGAGAAAATGCGGCTATTCTCCAGCTGTTTGCCTGCAAAAATTAGAC 3276488
Query 288350 GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAG 288409
|||| || || |||||| || || || || | |||||| |||| |||||||| | |
Sbjct 3276487 GCTGCTGGTCATGTGGGATGCCCTCCTTGTCTTCGATTTTAACTTTGACGTTTTCAGTGG 3276428
Query 288410 AATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469
||| | | || || ||||| |||| |||| || ||||| || || || ||||
Sbjct 3276427 TATCAGTGGGCTCGACCTCGAGTATGATGATCTTGCCCATCAGAAAATTCACAAAGATCT 3276368
Query 288470 GCAT 288473
||||
Sbjct 3276367 GCAT 3276364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179616765338220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |