Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 158 1e-33
seq1689 98.7 1e-15
seq1 98.7 1e-15
seq1767 89.7 5e-13
seq2080 86.0 6e-12
seq171 86.0 6e-12
seq54 86.0 6e-12
>seq1424
Length=2309046
Score = 158 bits (174), Expect = 1e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| || || |||||||||||||| | | ||||| | |||
Sbjct 23455 AGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCT 23514
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||||| ||||||||| ||||| || ||||| || ||
Sbjct 23515 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 23574
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||||||| ||| | || |||| || |||||||| | || | ||||
Sbjct 23575 TGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 23634
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||||||| || || ||||| |||||||||||
Sbjct 23635 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| | || | || || ||||| | ||||| ||||| ||||||||||| || |
Sbjct 22983 ACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGA 23042
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || ||||| ||||| ||| | ||||||| ||||||||| |||||
Sbjct 23043 AAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGG 23102
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || || || || || ||| ||| ||| | || |||| || |||||
Sbjct 23103 AATACCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCAC 23162
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||||||||||| || || ||||| || |||||
Sbjct 23163 TTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210
Score = 140 bits (154), Expect = 3e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| ||||| |||||||||||||| | | ||||| | ||
Sbjct 22771 AGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCC 22830
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||| ||| | || |||| ||||||||| ||||| || ||||| || ||
Sbjct 22831 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 22890
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || |||||||| | || | ||||
Sbjct 22891 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTC 22950
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||||| || || |||||||| |||||
Sbjct 22951 TTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| | || | || || ||||| | ||||| || || |||||||||||||| |
Sbjct 23211 ACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGA 23270
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || ||||| ||||| ||| | ||||||| ||||||||| || ||
Sbjct 23271 AAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGG 23330
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || || || ||| ||| ||| | || |||| | |||||
Sbjct 23331 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCAC 23390
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || | |||||||||||||| || || ||||| || |||||
Sbjct 23391 CTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23438
>seq1689
Length=2064527
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/221 (70%), Gaps = 1/221 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || ||||||||| ||||||| | | ||| | |
Sbjct 174756 TCTCAACACGAGATGAAGAGTGGACTCCTTTTGAATGCTGTAATCAGACAAGGTATGTCC 174815
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | ||||| | |||||||||||||| ||
Sbjct 174816 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTCCTTCCTT 174875
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
| || || || ||||| | | | | |||||| ||| || || || | ||| |
Sbjct 174876 ATTCTGGATCTTGGCCTTTATATCTCCTATTGTATCCAAGGCTTCAACCTCGAGAGTAAT 174935
Query 64408 GGTCTTGCC-GGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447
|||||| || || | ||||| | |||||| ||| | |||
Sbjct 174936 GGTCTTCCCTTGTAAGGGTTTTCAAGAAAATCTGCGTCTTA 174976
>seq1
Length=8996366
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297
||||||| || | || |||||||||| ||| || | | ||| | | | ||||| |
Sbjct 4848817 AGATGAAGAGTAAACTCCTTTTGAATGTGGTAGTCAGACAAGGTACACCCATCTTCCAAT 4848758
Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357
|||||||| ||| | || | |||||||| | |||||||||||| ||||| || ||
Sbjct 4848757 TGCTTGCCAGCAAAGATCAATACTTGCTGGTCAGAAGGAATTCCTTCCTTTTCCTGGATC 4848698
Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417
|| ||||||| || | |||| | || || | || | | | |||||||| |||
Sbjct 4848697 TTGGCCTTTACATTTTCTATTGTAACCAAAGCTTCAATCTCGAGAATGACGGTCTTTCCG 4848638
Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | |||||| | |||||| ||||| ||
Sbjct 4848637 GTAAGAGTTTTCAAGAAAATCTGCATCTT 4848609
>seq1767
Length=1785757
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/211 (70%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||||||||| || | | ||| | |
Sbjct 523800 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACATCC 523859
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| | || ||| | ||| | || || | |||| || |||||||||||||| ||
Sbjct 523860 ATCTTCCAATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGGAATTCCTTCCTT 523919
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | |||| | || || || || | ||| |
Sbjct 523920 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGAGTGAA 523979
Query 64408 GGTCTTGCCGGTCAA-AGTTTTTACGAAAAT 64437
|||||| || || || ||||| ||||||||
Sbjct 523980 GGTCTTCCCTGTTAAGGGTTTTCACGAAAAT 524010
>seq2080
Length=3818131
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||||| ||| || | | || | |
Sbjct 1111788 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTCGTAGTCAGATAGAGTATGTCC 1111729
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || |||| ||||| || |||||||||||||||||
Sbjct 1111728 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCTTT 1111669
Query 64348 TTCTTGTATTTTTTGCTTTA 64367
|| || || || |||||
Sbjct 1111668 ATCCTGGATCTTGGCCTTTA 1111649
>seq171
Length=354554
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/232 (69%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | | | ||||||| || || || |||||||||||||| ||
Sbjct 311020 ACCACCACGAAGTCTCAACGCAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTC--- 310964
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || |||||||| ||| | | || | ||||| || |||||
Sbjct 310963 -AGAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGG 310905
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCA-CTGTATCACCGGCGTCCA 64394
|||| |||| || | || ||||| ||||||| || | | |||| | || |
Sbjct 310904 AATTTCTTCCTTATTCTGAATTTTGGCCTTTACATTTTCTATCGTTATCTGAGTGTTCAA 310845
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| || | ||| | |||||| || | | |||||||| |||||| ||||| ||
Sbjct 310844 CCTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTTATGAAAATCTGCATCTT 310793
>seq54
Length=460634
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/198 (71%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||||||||| || || |||| || |||| | | || ||||| |||||
Sbjct 180515 GTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCAGCTGTTTGCCC 180456
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || ||||||||||| || ||||| || || || ||||| | |||| |||||
Sbjct 180455 ACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGA-TTTTAGCTTT 180397
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| || | || |||| ||| | || | | || | ||||||||| |||| ||
Sbjct 180396 GACATTTTCGATGGTGTCACTGGC-TGGACCTTGAGTGTGATGGTCTTGCCCGTCAGGGT 180338
Query 64426 TTTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 180337 CTTCACAAAGATCTGCAT 180320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499629248555600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |