Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq2035 156 6e-33 >seq2035 Length=3963056 Score = 156 bits (172), Expect = 6e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || |||| |||||||| ||||||| || || || ||||| || ||||| || || Sbjct 596361 GTCTGGAACAGACGCTCGTCATCCCATTCTGGATGCTCCTGTTTAAGCACATCACACACT 596420 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||| || |||| |||||| || |||||||||||||| | ||| ||||| | |||||| Sbjct 596421 CTGTTATGCTCTCGCAGCCAAATCGTGGCGTACATCATCAGACCAGGCACCAGGCCAAAC 596480 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | |||||| |||| ||||| | || || | | || | ||| | ||| | | Sbjct 596481 ACCTCCTGCCCCACAGCAAGCCGCAGGTGTTCAGGGATGTGAGGGGGATAGATCATCTCC 596540 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 ||||| | |||||||| ||||| |||||||| || || ||||| Sbjct 596541 ACCTGACTATCTTTGACTGTGGGAGGATACATCTCTCCATCAAT 596584 Score = 145 bits (160), Expect = 1e-29 Identities = 202/283 (71%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 ||||| || |||||||| || ||||| |||||||| | ||||| || | ||| | Sbjct 594786 GGACAACCTTTCACATTATTGCAGATGAGAGACTGAATTGAGGCGGTGTTGATGATTTTA 594845 Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013 || ||||| || || || || ||||| || |||||||| || || || || || Sbjct 594846 AAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTA 594905 Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 |||| || ||||||||||| || || || || | || | || ||||||| |||||| Sbjct 594906 CCCATAAGTCCTTTCAAGGAGAAAGGTGCTCCAACTTCTACCATAGTCTCACCAAAGATG 594965 Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133 ||| | ||||| || ||||| || | | | ||| || || || | || || | ||| Sbjct 594966 GCATCTGGACGAGGCTTTTCAACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 595025 Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCTA 9176 ||||| || ||||| ||||| ||||| || |||||||| |||| Sbjct 595026 CCATAAAGTGCTTCTAACTCCGCAGCCATTTCCTTCTCTCCTA 595068 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174 |||| |||||||||||| |||| |||| | || ||||| ||||||||| ||| || Sbjct 596927 GTTCTGTCTTACCCCATGACCCAGTCCTTTGGTAAAAGCTGGTCCTCGCTTATGATCTGT 596986 Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234 | | |||||||| || || || || || | || || || ||||||| || |||||||| Sbjct 596987 CTTGAAAAATTGATGGGTGAAATGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTG 597046 Query 10235 GGGATCGGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATC 10280 |||||| |||||||| | || | | | || ||| ||||||||| Sbjct 597047 GGGATCAGGGATAAACTTTCTTCTTAGGAGAAATTTTTCCACAATC 597092 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | | ||| |||||||| || || || || ||| ||| ||| Sbjct 597516 TCACCTTTCACACCCATGGCAGTTGGGCAGTCGTCAGCCACAGGGGGAAGAACTCTGGTA 597575 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| ||||| ||||| ||||||||||| ||||||||||| | | || || Sbjct 597576 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGTGCATTATAAGTT 597635 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || |||||||||| || || |||||| Sbjct 597636 GGTGGGCTGTCAATCAGATCTGATCTGGCT 597665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723705473966000