Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq2363 158 1e-33
seq1424 141 1e-28
>seq2363
Length=646923
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| |||| ||| |||||| ||||| |||||||||||
Sbjct 187677 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 187618
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| ||||| || ||||| | ||||||||| | ||
Sbjct 187617 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 187558
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| |||||| ||||| || | | |||||||| | |||||
Sbjct 187557 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 187498
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| || || ||||| || || || ||||| |||||
Sbjct 187497 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187451
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| |||| || |||||| ||||| |||||||||||
Sbjct 186441 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 186382
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| ||||| || |||| | ||||||||| | ||
Sbjct 186381 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 186322
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| |||||| ||||| || | | |||||||| | |||||
Sbjct 186321 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 186262
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| |||||||| || | |||||| || || || ||||| ||||||
Sbjct 186261 TCCAGGGTGATGGTCTTCCGCGTCAGGGTCTTCACGAAGATCTGCATT 186214
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| |||| || |||||| ||||| |||||||||||
Sbjct 187116 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 187057
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| ||||| || |||| | ||||||||| | ||
Sbjct 187056 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 186997
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| |||||| ||||| || | | |||||||| | |||||
Sbjct 186996 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 186937
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| |||||||| || || ||||| || || || ||||| ||||||
Sbjct 186936 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCATT 186889
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| |||| || |||||| ||||| |||||||||||
Sbjct 186669 CCACCTCTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 186610
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| ||||| || |||| | ||||||||| | ||
Sbjct 186609 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 186550
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||||| |||||| ||||| || | | |||||||| | |||||
Sbjct 186549 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 186490
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| || || ||||| || || || ||||| |||||
Sbjct 186489 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186443
Score = 143 bits (158), Expect = 3e-29
Identities = 162/216 (75%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||||| |||| || |||||| ||||| ||||||||||| || ||||| |
Sbjct 186885 ACGCAGGACCAGGTGCAGGGTGA-CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 186827
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || |||||||| ||||| || |||| | ||||||||| | || | || ||||||
Sbjct 186826 GTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTT 186767
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| || | | |||||||| | ||||| |||| |||||
Sbjct 186766 GTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGAT 186707
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || ||||| || || || ||||| |||||
Sbjct 186706 GGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186671
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||||| || || | ||||| |||| || |||||| ||||| |||||||||||
Sbjct 187905 CCTCCTCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 187846
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| ||||| || |||| | ||||||||| | ||
Sbjct 187845 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 187786
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||| |||||| ||||| || | | |||||||| | |||||
Sbjct 187785 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 187726
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| || || ||||| || || || ||||| |||||
Sbjct 187725 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
Score = 140 bits (154), Expect = 4e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||| ||||| ||
Sbjct 187309 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 187250
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| | ||||||||| | || | || |||||||||| |||||| ||||| |
Sbjct 187249 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 187190
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||||| | ||||| |||| |||||||| || || ||||| || || ||
Sbjct 187189 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 187130
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 187129 GAAGATCTGCAT 187118
>seq1424
Length=2309046
Score = 141 bits (156), Expect = 1e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||||| |||||||||| || |||||| || || ||||| || ||
Sbjct 23440 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAA 23499
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|||||||| | || || ||||||||||| || || || | | ||||||||| | ||
Sbjct 23500 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 23559
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||||| ||| |||||| ||| | || | | ||||| || | ||||||
Sbjct 23560 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACT 23619
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|||| |||||||| ||||| ||||| || || || |||||||||||||||
Sbjct 23620 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 23670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565220806954800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |