Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2123 168 3e-36 seq2203 123 1e-22 seq2429 113 2e-19 seq1767 102 3e-16 seq1689 102 3e-16 seq558 100 1e-15 seq171 98.7 4e-15 seq1912 89.7 2e-12 >seq2123 Length=1033990 Score = 168 bits (186), Expect = 3e-36 Identities = 455/693 (66%), Gaps = 5/693 (1%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || ||||| || || || || ||||||| |||||||| || || | ||| |||| || Sbjct 481521 GCCATTGGCATCGACCTGGGCACCACCTACTCATGTGTGGGGGTGTTCCAGCATGGCAAG 481580 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || || || || || ||||| || || || || ||| | || || || Sbjct 481581 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCTAGCTACGTGGCCTTCACC 481640 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAA 451092 ||| | || | || | ||| | || || || | | | |||| ||| || | || Sbjct 481641 GATACTGAGCGGCTCATCGGGGATGCCGCCAAGAACCA-GGTAGCCATGAATCCCCAGAA 481699 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 ||| || | |||||| |||||| | |||||| | | | | ||||| | |||||| Sbjct 481700 CACTGTCTTTGATGCCAAACGTCTGATTGGCAGAAAATTTAATGATCCTGTAGTACAATC 481759 Query 451153 AGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGT 451212 ||| | ||| | | ||| | | ||| | ||| || ||| ||||| | | | || Sbjct 481760 AGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCTAAGGTGCTGGT 481819 Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272 || ||||| || | ||| |||| ||||||||||| || |||||||| || || Sbjct 481820 GTCCTACAAAGGGGAGAAAAAAGCTTTCTACCCTGAAGAAATCTCTTCTATGGTACTAAC 481879 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 ||||||||| || || || || | | | || || || || |||| || || || Sbjct 481880 TAAAATGAAGGAGACTGCTGAGGCTTTTTTAGGCCACCCTGTCACCAATGCTGTGATCAC 481939 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 ||| || || ||||||||||| | ||||| || || || || |||||||| ||||| Sbjct 481940 TGTGCCAGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGTGATTGC 481999 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||| | ||||| | ||||||| |||||||| ||||| ||||| | || ||||| | Sbjct 482000 AGGTCTCAATGTGTTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCCTATGGCTT 482059 Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512 || ||| | || | ||| | || | | | |||||| | |||||||| || Sbjct 482060 AGATAAAGC---AGGTCAGGGAGAGCGACATGTACTGATCTTTGATCTGGGTGGAGGCAC 482116 Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572 |||| || | || | || || |||||| | ||||| |||||||| || ||| Sbjct 482117 ATTTGATGTGTCCATCCTGACCATAGATGATGGGATTTTTGAGGTAAAGGCCACAGCTGG 482176 Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || | || || || || |||| || Sbjct 482177 GGACACCCACTTGGGTGGAGAGGACTTTGACAA 482209 >seq2203 Length=850018 Score = 123 bits (136), Expect = 1e-22 Identities = 173/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||||| | || ||||| || || |||| || ||| || || | |||||||||||| Sbjct 410141 CAAGTAGAATACAAAGGAGAGACAAAAAGTTCCTATCCAGAGGAGGTGTCATCTATGGTT 410082 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATA-TATTGGTTCTCCAGTTACTGATGCAGT 451326 | || || | ||| |||| |||||| || |||| ||| |||| |||| || Sbjct 410081 TTGACAAAGACGAAGGAAATTGCAGAAGCCTACCTTTGGAAGACCA-TTACAAATGCTGT 410023 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 || || || || ||||| |||||||| | || |||| || || |||||||| ||| Sbjct 410022 CATAACAGTACCTGCTTACTTCAATGACTCTCAGTGGCAGGCCACCAAAGATGCTGGAAT 409963 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 |||||||||| | ||||| ||| ||||||| ||||| || || || |||||| | || || Sbjct 409962 TATTGCTGGTCTCAATGTACTTAGAATTATCAATGAGCCAACTGCTGCTGCTATTGCTTA 409903 >seq2429 Length=579621 Score = 113 bits (124), Expect = 2e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| |||| || | || || || |||||||||||||| | || ||||| || || Sbjct 350608 GTTACAAATGCTGTGGTCACAGTACCTGCTTATTTCAATGACTCTCAGCGGCAGGCTACC 350549 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| |||||||||| | ||||| ||| ||||||| |||||||| || || Sbjct 350548 AAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTAGAATTATCAATGAACCAACTGCT 350489 Query 451433 GCTGCTCTAGCATATGG 451449 |||||| | || ||||| Sbjct 350488 GCTGCTATTGCTTATGG 350472 Score = 84.2 bits (92), Expect = 9e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| | ||||| Sbjct 351565 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGAAAA 351506 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 || ||||| || || || ||||| ||| ||||||||||| Sbjct 351505 GTGGAAATAATTGCCAACGACCAGGGAAACCGAACTACTCC 351465 >seq1767 Length=1785757 Score = 102 bits (112), Expect = 3e-16 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGA-CTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAA 391114 |||||||| ||||| || | | || || || | |||||||| |||||| | || | || Sbjct 524010 ATTTTCGTGAAAACCCTTAACAGGGAAGACCTTCACTCTTGAGGTTGAACCCTCGGTTAC 523951 Query 391115 CATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 || ||| | | || || || || |||||||||||||||||||||||||| | | | Sbjct 523950 AATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCGAAG 523891 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 | || || | | |||||| | ||||||||| | || ||| | || || || ||| | Sbjct 523890 ACTGATCTTTGCTGACAAACAATTGGAAGATGGATGTACCTTGTCTGACTACAACATTCA 523831 Query 391235 TAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | || ||||| | || || ||||| Sbjct 523830 AAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 523798 >seq1689 Length=2064527 Score = 102 bits (112), Expect = 3e-16 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACT-GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAA 391114 |||||| | ||||| || || || || || |||||||| || |||||| | | |||| Sbjct 174966 ATTTTCTTGAAAACCCTTACAAGGGAAGACCATTACTCTCGAGGTTGAAGCCTTGGATAC 174907 Query 391115 CATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 || | || ||| || || || || |||||||||||||||||||| |||| ||| | Sbjct 174906 AATAGGAGATATAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTCATCAGCAAAG 174847 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 | || || | || || ||||| ||||||||| || ||| | ||||| | ||| | Sbjct 174846 ACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACCTTGTCTGATTACAGCATTCA 174787 Query 391235 TAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | || ||||| | || || ||||| Sbjct 174786 AAAGGAGTCCACTCTTCATCTCGTGTTGAGACT 174754 >seq558 Length=2832783 Score = 100 bits (110), Expect = 1e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 935332 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 935391 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||| ||||| || |||||| | |||| || ||||| || Sbjct 935392 AAAGATGCTGGAACTATCGCTGGATTGAATGTTATGAGAATCATCAATGAGCC 935444 >seq171 Length=354554 Score = 98.7 bits (108), Expect = 4e-15 Identities = 145/204 (71%), Gaps = 5/204 (2%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || | || || || || ||||| || |||||| || Sbjct 310796 ATGCAGATTTTCATAAAAACTCTTATGGGGAAGACCATCACTCTCGAGGTTGAACACTCA 310855 Query 391110 GATAAC-ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||||| || ||| | | || |||||||| ||||||||| ||||||||||||||| Sbjct 310856 GATAACGATAGAAAATGTAAAGGCCAAAATTCAGAATAAGGAAGAAATTCCTCCTGATCA 310915 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | | || | || || ||||| ||||||||| | ||| | || || || Sbjct 310916 GCAAAGACTGACCTTTGCTGGCAAGCAACTGGAAGATGGATGTACT----CTGACTACAA 310971 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | |||||||| Sbjct 310972 CATTCAAAAGGAGTCCACACTTCA 310995 >seq1912 Length=1420177 Score = 89.7 bits (98), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || ||||| ||||| || || || ||||| ||||||| ||||| | ||||||||| Sbjct 475376 CAGGCCACTAAGGATGCTGGCCAGATAGCTGGACTAAATGTGCTTCGGGTGATTAATGAA 475435 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 || ||||| |||||||| || ||||| |||| ||||| |||| Sbjct 475436 CCCACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCGGAAGA 475479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975655368408920