Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq2123 199 3e-45
seq2429 122 7e-22
seq2203 109 4e-18
seq558 107 1e-17
seq1991 96.9 3e-14
seq435 89.7 4e-12
>seq2123
Length=1033990
Score = 199 bits (220), Expect = 3e-45
Identities = 914/1431 (64%), Gaps = 18/1431 (1%)
Strand=Plus/Minus
Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317
||| || ||||| |||||||| |||||||| | ||||| || ||||| || ||||| ||
Sbjct 482975 GGCCGTTACATTGAGAATACCGTTGGCATCGATGTCAAAGGTTACTTCGATCTGAGGAAC 482916
Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377
||||| | ||||| ||||| || || | ||| ||||| ||| || || |
Sbjct 482915 TCCTCTAGGTGCAGGAGGGATTCCAGTCAGGTCAAAGCGCCCCAGCAGATTGTTGTCCCT 482856
Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437
|| | | || ||||| | | ||||| || ||| || |||||||| ||
Sbjct 482855 CGTCATGGCCCTCTCGCCCTCATACACCTGGATCAATACCCCAGGCTGGTTATCTGAGTA 482796
Query 517438 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496
||| || || | |||| | | || || || || | ||| | | ||| | |
Sbjct 482795 AGTGGTGAAGA-TCTGTGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTAATTAGGACCG 482737
Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556
|||| | ||| || ||||| || || || | || | |||| ||||| | | | |
Sbjct 482736 TCATCACACCCCCGGCTGTCTCCAACCCTAAGGACAAGGGAGCCACATCTAACAAAAGCA 482677
Query 517557 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616
| || | ||||| | | || | | ||| ||||| || | ||||| ||||
Sbjct 482676 GGTCCTGTACCTTTTCGGACTTGTCCCCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 482617
Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676
| || || || ||||| || || | | | || || | ||||| || | |
Sbjct 482616 AGGCCACTGCCTCATCTGGGTTGATGCTCTTGTTGAGATCACGGCCATTAAAGTAGTCCT 482557
Query 517677 AAAGAAGTTGTCTTA-CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735
|| || ||| | ||||||| || || | || ||||| ||||| ||||| |||||
Sbjct 482556 GCAGCAGCC-TCTGAACCTTAGGGATGCGGGTAGAGCCTCCTACTAAAACAATGTCATGA 482498
Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795
| | | |||||||| || | ||| | | | || || || || || ||| |
Sbjct 482497 ATTTTAGCTTTATCCATCTTGGCATCACGAAGAGCCTTCTCCACAGGCTCCAGAGTGCCC 482438
Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 517853
|| |||| |||| ||| | || || || ||||| |||| | || | || || |
Sbjct 482437 CTGAACAGATCTGCACACAACTCCTCAAACCGGGCTCTGGTAATGG--ACGTGTAGAAGT 482380
Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913
|||||||||| || | ||||| | ||| | | | ||||| || || || | |
Sbjct 482379 CAATTCCTTCAAAAAGTGAATCGATTTCCAAGTTGGCCTGAGTGCTGGATGACAGGGTCC 482320
Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTGCTGATTGATTCAA 517971
|| || | ||||| || || | || | | | ||| ||| | ||| | |
Sbjct 482319 TCTTGGCCCTCTCACAGGCAGTTCGCAGCCGCCTCACAGCTCGCTTGTT--TTGGCTGAT 482262
Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031
|| | || | || |||||||| ||||| ||| | | || || | || |||||
Sbjct 482261 GTCCTTCTTGTGCTTCCTCTTGAACTCTTCCACAAAGTGACTCACCAGTCTGTTGTCAAA 482202
Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091
|| || || ||||| | || | || | || || |||| | |||| ||||| ||
Sbjct 482201 GTCCTCTCCACCCAAGTGGGTGTCCCCAGCTGTGGCCTTTACCTCAAAAATCCCATCATC 482142
Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TCA 518150
| | || | | |||||| || || ||||||| |||||| || ||||||| ||
Sbjct 482141 TATGGTCAGGATGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGTACATGTCG 482082
Query 518151 TT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209
| || || | || ||| | | ||| ||||| |||| |||||||| || ||||||||
Sbjct 482081 CTCTCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGGTTCATTG 482024
Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269
|||||||| || ||||| ||||| ||||| |||||||| || ||||| || | |||
Sbjct 482023 ATAATTCTTAACACATTGAGACCTGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGA 481964
Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329
|| || || ||||| || || ||||| || || |||| || || | || | | ||
Sbjct 481963 GAGTCATTGAAATAGGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCTAAAAAA 481904
Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389
|| || || | ||||||||| ||| | ||| || || |||| ||| ||| | |
Sbjct 481903 GCCTCAGCAGTCTCCTTCATTTTAGTTAGTACCATAGAAGAGATTTCTTCAGGGTAGAAA 481844
Query 518390 TGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448
|||| | || || || || || | | || || || |||| || ||
Sbjct 481843 -GCTTTTTTCTCCCCTTTGTAGGACACCAGCACCTTAGGCTTGCCTCCTTCATTGATTAC 481785
Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508
|| ||| ||||| ||||||||||||||| || | |||||||| | ||| |||||
Sbjct 481784 TTGAAAAGGCCAAAGTTTCATATCTGATTGTACTACAGGATCATTAAATTTTCTGCCAAT 481725
Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568
| ||||| |||||||| | ||| || ||||| || || | || | ||||| ||
Sbjct 481724 CAGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCGGC 481665
Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628
||| || || || | || || || || || | || || || || ||||| || ||
Sbjct 481664 ATCCCCGATGAGCCGCTCAGTATCGGTGAAGGCCACGTAGCTAGGGGTGGTGCGGTTGCC 481605
Query 518629 TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679
|| || || || || || || || || |||| || | || || |||||
Sbjct 481604 CTGGTCGTTGGCGATGATCTCCACCTTGCCATGCTGGAACACCCCCACACA 481554
>seq2429
Length=579621
Score = 122 bits (134), Expect = 7e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|||||||| | ||||| |||| ||||||||||||||||||||| |||||||| | |||
Sbjct 350460 TTTTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCTAAGTACA 350519
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| ||||||||||| |||| |||||||| || || || | || || || || |||||
Sbjct 350520 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGCCGCTGAGAGTCATTGAAATAA 350579
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
||||| || || | || ||||
Sbjct 350580 GCAGGTACTGTGACCACAGCAT 350601
Score = 120 bits (132), Expect = 2e-21
Identities = 363/552 (66%), Gaps = 14/552 (3%)
Strand=Plus/Plus
Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669
|||||||| || |||||||||||||| || | | | ||| | || ||| ||||||||
Sbjct 349814 GCACCATAAGCGACAGCTTCATCAGGGTTGATGCTCTTATTCAATTCTTTTCCATTGAAG 349873
Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728
|| | ||||||| ||| | |||||| ||||| | || || || || | |||||
Sbjct 349874 AAGTCCTGTAGAAGTT-TCTGAATCTTAGGGATACGGGTAGAACCACCCACCAGGACAAT 349932
Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788
||||| | ||| || || || || || | |||| | ||||||| || || || ||
Sbjct 349933 ATCATGGATCTGGGACTTGTCGAGCTTCGCATCCCGAAGGGCTTTTTCTACAGGGTCCAG 349992
Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848
| | || | ||| | | | |||||| ||| || | ||| | || | ||
Sbjct 349993 GGTGCCACGGAAAAGGTCAGCATTCAATTCTTCAAATCGGGCACGAGTGATAGAGGTATA 350052
Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908
| || |||||||| | | ||||||| ||||| | | || || ||||| ||
Sbjct 350053 GAAGTCGATTCCTTCATAGAGCGAATCAATCTCAATACTGGCCTGGGTACTGGAAGAAAG 350112
Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG-GCTTTTG--CTGATT 517964
| ||| |||||||||||||| || || | || | || | || |||||| || | |
Sbjct 350113 GGTACGCTTAGCACGTTCACAAGCAGTGCGGAGACGTCTGACAGCCCTTTTGTTCTCACT 350172
Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022
||| || | |||| || | ||| || ||| ||| | | ||| | || | ||
Sbjct 350173 GAT----GTCCTTCTTATGCTTGCGCTTAAACTCTGCAATAAA--ATGGTTGACCATTCG 350226
Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082
|| ||||| ||||| || || || | || | || | |||| | | |||| |||||
Sbjct 350227 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTCACTTCGAAAAT 350286
Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142
||||||||||| | | || | |||||| || ||||| |||| ||||| || ||
Sbjct 350287 TCCATCTTCAATTGTGAGAATCGACACATCAAAAGTGCCACCTCCCAAGTCAAAGATCAG 350346
Query 518143 TACATTCATTTC 518154
||||| ||||
Sbjct 350347 CACATTTCTTTC 350358
>seq2203
Length=850018
Score = 109 bits (120), Expect = 4e-18
Identities = 348/533 (65%), Gaps = 9/533 (2%)
Strand=Plus/Plus
Query 518180 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 518239
|| |||| ||||||||||||||| ||||| |||||||| | ||||| |||||||||||
Sbjct 409903 TAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATTCTAAGTACATTGAGACCAGCAATA 409962
Query 518240 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 518299
|||| |||||||| ||||| || | || || || || || || ||||| || || ||
Sbjct 409963 ATTCCAGCATCTTTGGTGGCCTGCCACTGAGAGTCATTGAAGTAAGCAGGTACTGTTATG 410022
Query 518300 ACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAA 518359
|| |||| || | || | || || || ||| ||| ||| | || | |||
Sbjct 410023 ACAGCATTTGTAATGGTCTTCCAAAGGTAGGCTTCTGCAATTTCCTTCGTCTTTGTCAAA 410082
Query 518360 ATCATTGATGAAATTTGTTCTGG---GGAATATTGCTTGGATTCATTTTGATATGATACT 518416
| ||| ||||| | | ||||| |||| || ||| | |||| ||| ||||
Sbjct 410083 ACCATAGATGACACCTCCTCTGGATAGGAACTTT--TTGTCTCTCCTTTG-TATTCTACT 410139
Query 518417 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476
| | || || | || ||| | || | || || | | |||||||| |||
Sbjct 410140 T-GGCCTTGGGCTTGCCAGCATTATTCACCACCATGAAGGGGCGATGGTTCATATCAGAT 410198
Query 518477 TGAACACTTTGGTCATTAAAATCTCTACCAATT-AATCGTTTTGCATCAAAAATAGTATT 518535
|| ||| ||| | |||||| | | ||| | |||| ||||||||| | ||
Sbjct 410199 TGGACAACAGTATCA-TCAAATCTATGTCTATTCAGGTGTTTGGCATCAAAAGCCATGTT 410257
Query 518536 GGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 518595
||| || | ||||| |||| | || || ||||| || |||| || || | || ||
Sbjct 410258 GGTGGGGGTCATTGCCACTTGTTTCTTTGCAGCATCACCTATCAATTGCTCCATATCAGT 410317
Query 518596 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655
||| | || || |||| | || | || | | || || ||||| ||||| ||||
Sbjct 410318 AAAGTACACCTAACTTGGAATGGTTTGGTTTTCCTAATTGTTGGCAATTATTTCCACTTC 410377
Query 518656 ACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708
| | || | ||||| |||||| |||| || || | |||||| ||||
Sbjct 410378 TCTACGCTGGAAGACACCCACACAAGAGTAAGTGGTGCCGAGATCAATGCCAA 410430
>seq558
Length=2832783
Score = 107 bits (118), Expect = 1e-17
Identities = 207/300 (69%), Gaps = 18/300 (6%)
Strand=Plus/Minus
Query 517090 AGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCT 517147
|| |||| |||||||||||||| ||| ||||| || ||| || ||| |||||| |
Sbjct 937524 AGCATAACTTTCTAATTCATTTCTAGTATCAAT-GC-GCTCCTTGAGCTTTTTATCTTCC 937467
Query 517148 TCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAATCT 517203
|| |||| | || ||| || ||| ||| || || || | || |||| || |
Sbjct 937466 TCAGCAAACTTTTCAGCATCATTAACCATCCTTTCGATCTCTTCAGGTGTCAGGCGATTT 937407
Query 517204 TCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGC 517260
| ||| ||| ||||| || || || || |||||| ||| ||| || | ||
Sbjct 937406 T----GATCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGC 937354
Query 517261 AGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCC 517320
||||| |||||| ||||| |||| | ||||| ||||||||||| || ||||| ||
Sbjct 937353 TGTCACTCGAAGAATGCCATTCACATCTATCTCAAAAGTGACTTCAATCTGTGGGACTCC 937294
Query 517321 TCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380
| ||||||| ||||| || || || ||| ||||||||| || ||| ||||| ||
Sbjct 937293 ACGGGGAGCAGGAGGGATTCCAGTCAGATCAAAAGTTCCCAGAAGATGATTGTCTTTTGT 937234
>seq1991
Length=4069235
Score = 96.9 bits (106), Expect = 3e-14
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500
||||| || || |||| |||||||| ||||||||||| || ||| | || || ||| |
Sbjct 1615253 TGTACACTTATCCTGACCGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 1615312
Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560
|| |||| |||||| ||||| |||||||| |||||||||||| | | |||||| |
Sbjct 1615313 GTGGTTGGGAGAGATAGATATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 1615372
Query 635561 GATGCT 635566
|| |||
Sbjct 1615373 GAAGCT 1615378
>seq435
Length=2947834
Score = 89.7 bits (98), Expect = 4e-12
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052
||| ||||| || ||||| ||||| ||||| ||||||||| | || || | || ||
Sbjct 1511763 TGTCGTAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTCAT 1511822
Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112
||||||||| ||||| ||| | || || ||||| || || ||||||||||| || ||
Sbjct 1511823 TCATTATGGTGCTCCTAAGGAAATGGAGTCATATTACCAGGAGATTGGTAGAGCTGGCCG 1511882
Query 367113 TGATGGA 367119
||||||
Sbjct 1511883 CGATGGA 1511889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780698837997940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |