Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2123 199 3e-45 seq2429 122 7e-22 seq2203 109 4e-18 seq558 107 1e-17 seq1991 96.9 3e-14 seq435 89.7 4e-12 >seq2123 Length=1033990 Score = 199 bits (220), Expect = 3e-45 Identities = 914/1431 (64%), Gaps = 18/1431 (1%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||| || ||||| |||||||| |||||||| | ||||| || ||||| || ||||| || Sbjct 482975 GGCCGTTACATTGAGAATACCGTTGGCATCGATGTCAAAGGTTACTTCGATCTGAGGAAC 482916 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| | ||||| ||||| || || | ||| ||||| ||| || || | Sbjct 482915 TCCTCTAGGTGCAGGAGGGATTCCAGTCAGGTCAAAGCGCCCCAGCAGATTGTTGTCCCT 482856 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || | | || ||||| | | ||||| || ||| || |||||||| || Sbjct 482855 CGTCATGGCCCTCTCGCCCTCATACACCTGGATCAATACCCCAGGCTGGTTATCTGAGTA 482796 Query 517438 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496 ||| || || | |||| | | || || || || | ||| | | ||| | | Sbjct 482795 AGTGGTGAAGA-TCTGTGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTAATTAGGACCG 482737 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556 |||| | ||| || ||||| || || || | || | |||| ||||| | | | | Sbjct 482736 TCATCACACCCCCGGCTGTCTCCAACCCTAAGGACAAGGGAGCCACATCTAACAAAAGCA 482677 Query 517557 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 | || | ||||| | | || | | ||| ||||| || | ||||| |||| Sbjct 482676 GGTCCTGTACCTTTTCGGACTTGTCCCCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 482617 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 517676 | || || || ||||| || || | | | || || | ||||| || | | Sbjct 482616 AGGCCACTGCCTCATCTGGGTTGATGCTCTTGTTGAGATCACGGCCATTAAAGTAGTCCT 482557 Query 517677 AAAGAAGTTGTCTTA-CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 || || ||| | ||||||| || || | || ||||| ||||| ||||| ||||| Sbjct 482556 GCAGCAGCC-TCTGAACCTTAGGGATGCGGGTAGAGCCTCCTACTAAAACAATGTCATGA 482498 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795 | | | |||||||| || | ||| | | | || || || || || ||| | Sbjct 482497 ATTTTAGCTTTATCCATCTTGGCATCACGAAGAGCCTTCTCCACAGGCTCCAGAGTGCCC 482438 Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 517853 || |||| |||| ||| | || || || ||||| |||| | || | || || | Sbjct 482437 CTGAACAGATCTGCACACAACTCCTCAAACCGGGCTCTGGTAATGG--ACGTGTAGAAGT 482380 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 |||||||||| || | ||||| | ||| | | | ||||| || || || | | Sbjct 482379 CAATTCCTTCAAAAAGTGAATCGATTTCCAAGTTGGCCTGAGTGCTGGATGACAGGGTCC 482320 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTGCTGATTGATTCAA 517971 || || | ||||| || || | || | | | ||| ||| | ||| | | Sbjct 482319 TCTTGGCCCTCTCACAGGCAGTTCGCAGCCGCCTCACAGCTCGCTTGTT--TTGGCTGAT 482262 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 || | || | || |||||||| ||||| ||| | | || || | || ||||| Sbjct 482261 GTCCTTCTTGTGCTTCCTCTTGAACTCTTCCACAAAGTGACTCACCAGTCTGTTGTCAAA 482202 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 || || || ||||| | || | || | || || |||| | |||| ||||| || Sbjct 482201 GTCCTCTCCACCCAAGTGGGTGTCCCCAGCTGTGGCCTTTACCTCAAAAATCCCATCATC 482142 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TCA 518150 | | || | | |||||| || || ||||||| |||||| || ||||||| || Sbjct 482141 TATGGTCAGGATGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGTACATGTCG 482082 Query 518151 TT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 | || || | || ||| | | ||| ||||| |||| |||||||| || |||||||| Sbjct 482081 CTCTCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGGTTCATTG 482024 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 |||||||| || ||||| ||||| ||||| |||||||| || ||||| || | ||| Sbjct 482023 ATAATTCTTAACACATTGAGACCTGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGA 481964 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 || || || ||||| || || ||||| || || |||| || || | || | | || Sbjct 481963 GAGTCATTGAAATAGGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCTAAAAAA 481904 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 || || || | ||||||||| ||| | ||| || || |||| ||| ||| | | Sbjct 481903 GCCTCAGCAGTCTCCTTCATTTTAGTTAGTACCATAGAAGAGATTTCTTCAGGGTAGAAA 481844 Query 518390 TGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448 |||| | || || || || || | | || || || |||| || || Sbjct 481843 -GCTTTTTTCTCCCCTTTGTAGGACACCAGCACCTTAGGCTTGCCTCCTTCATTGATTAC 481785 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 518508 || ||| ||||| ||||||||||||||| || | |||||||| | ||| ||||| Sbjct 481784 TTGAAAAGGCCAAAGTTTCATATCTGATTGTACTACAGGATCATTAAATTTTCTGCCAAT 481725 Query 518509 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGC 518568 | ||||| |||||||| | ||| || ||||| || || | || | ||||| || Sbjct 481724 CAGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCGGC 481665 Query 518569 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 518628 ||| || || || | || || || || || | || || || || ||||| || || Sbjct 481664 ATCCCCGATGAGCCGCTCAGTATCGGTGAAGGCCACGTAGCTAGGGGTGGTGCGGTTGCC 481605 Query 518629 TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || || || || || || || || |||| || | || || ||||| Sbjct 481604 CTGGTCGTTGGCGATGATCTCCACCTTGCCATGCTGGAACACCCCCACACA 481554 >seq2429 Length=579621 Score = 122 bits (134), Expect = 7e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| | ||||| |||| ||||||||||||||||||||| |||||||| | ||| Sbjct 350460 TTTTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCTAAGTACA 350519 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||||||||| |||| |||||||| || || || | || || || || ||||| Sbjct 350520 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGCCGCTGAGAGTCATTGAAATAA 350579 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||| || || | || |||| Sbjct 350580 GCAGGTACTGTGACCACAGCAT 350601 Score = 120 bits (132), Expect = 2e-21 Identities = 363/552 (66%), Gaps = 14/552 (3%) Strand=Plus/Plus Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 |||||||| || |||||||||||||| || | | | ||| | || ||| |||||||| Sbjct 349814 GCACCATAAGCGACAGCTTCATCAGGGTTGATGCTCTTATTCAATTCTTTTCCATTGAAG 349873 Query 517670 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 517728 || | ||||||| ||| | |||||| ||||| | || || || || | ||||| Sbjct 349874 AAGTCCTGTAGAAGTT-TCTGAATCTTAGGGATACGGGTAGAACCACCCACCAGGACAAT 349932 Query 517729 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 517788 ||||| | ||| || || || || || | |||| | ||||||| || || || || Sbjct 349933 ATCATGGATCTGGGACTTGTCGAGCTTCGCATCCCGAAGGGCTTTTTCTACAGGGTCCAG 349992 Query 517789 ACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 517848 | | || | ||| | | | |||||| ||| || | ||| | || | || Sbjct 349993 GGTGCCACGGAAAAGGTCAGCATTCAATTCTTCAAATCGGGCACGAGTGATAGAGGTATA 350052 Query 517849 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 | || |||||||| | | ||||||| ||||| | | || || ||||| || Sbjct 350053 GAAGTCGATTCCTTCATAGAGCGAATCAATCTCAATACTGGCCTGGGTACTGGAAGAAAG 350112 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG-GCTTTTG--CTGATT 517964 | ||| |||||||||||||| || || | || | || | || |||||| || | | Sbjct 350113 GGTACGCTTAGCACGTTCACAAGCAGTGCGGAGACGTCTGACAGCCCTTTTGTTCTCACT 350172 Query 517965 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 518022 ||| || | |||| || | ||| || ||| ||| | | ||| | || | || Sbjct 350173 GAT----GTCCTTCTTATGCTTGCGCTTAAACTCTGCAATAAA--ATGGTTGACCATTCG 350226 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 || ||||| ||||| || || || | || | || | |||| | | |||| ||||| Sbjct 350227 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTCACTTCGAAAAT 350286 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||||||||| | | || | |||||| || ||||| |||| ||||| || || Sbjct 350287 TCCATCTTCAATTGTGAGAATCGACACATCAAAAGTGCCACCTCCCAAGTCAAAGATCAG 350346 Query 518143 TACATTCATTTC 518154 ||||| |||| Sbjct 350347 CACATTTCTTTC 350358 >seq2203 Length=850018 Score = 109 bits (120), Expect = 4e-18 Identities = 348/533 (65%), Gaps = 9/533 (2%) Strand=Plus/Plus Query 518180 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 518239 || |||| ||||||||||||||| ||||| |||||||| | ||||| ||||||||||| Sbjct 409903 TAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATTCTAAGTACATTGAGACCAGCAATA 409962 Query 518240 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 518299 |||| |||||||| ||||| || | || || || || || || ||||| || || || Sbjct 409963 ATTCCAGCATCTTTGGTGGCCTGCCACTGAGAGTCATTGAAGTAAGCAGGTACTGTTATG 410022 Query 518300 ACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAA 518359 || |||| || | || | || || || ||| ||| ||| | || | ||| Sbjct 410023 ACAGCATTTGTAATGGTCTTCCAAAGGTAGGCTTCTGCAATTTCCTTCGTCTTTGTCAAA 410082 Query 518360 ATCATTGATGAAATTTGTTCTGG---GGAATATTGCTTGGATTCATTTTGATATGATACT 518416 | ||| ||||| | | ||||| |||| || ||| | |||| ||| |||| Sbjct 410083 ACCATAGATGACACCTCCTCTGGATAGGAACTTT--TTGTCTCTCCTTTG-TATTCTACT 410139 Query 518417 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGAT 518476 | | || || | || ||| | || | || || | | |||||||| ||| Sbjct 410140 T-GGCCTTGGGCTTGCCAGCATTATTCACCACCATGAAGGGGCGATGGTTCATATCAGAT 410198 Query 518477 TGAACACTTTGGTCATTAAAATCTCTACCAATT-AATCGTTTTGCATCAAAAATAGTATT 518535 || ||| ||| | |||||| | | ||| | |||| ||||||||| | || Sbjct 410199 TGGACAACAGTATCA-TCAAATCTATGTCTATTCAGGTGTTTGGCATCAAAAGCCATGTT 410257 Query 518536 GGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 518595 ||| || | ||||| |||| | || || ||||| || |||| || || | || || Sbjct 410258 GGTGGGGGTCATTGCCACTTGTTTCTTTGCAGCATCACCTATCAATTGCTCCATATCAGT 410317 Query 518596 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTT 518655 ||| | || || |||| | || | || | | || || ||||| ||||| |||| Sbjct 410318 AAAGTACACCTAACTTGGAATGGTTTGGTTTTCCTAATTGTTGGCAATTATTTCCACTTC 410377 Query 518656 ACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 | | || | ||||| |||||| |||| || || | |||||| |||| Sbjct 410378 TCTACGCTGGAAGACACCCACACAAGAGTAAGTGGTGCCGAGATCAATGCCAA 410430 >seq558 Length=2832783 Score = 107 bits (118), Expect = 1e-17 Identities = 207/300 (69%), Gaps = 18/300 (6%) Strand=Plus/Minus Query 517090 AGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCT 517147 || |||| |||||||||||||| ||| ||||| || ||| || ||| |||||| | Sbjct 937524 AGCATAACTTTCTAATTCATTTCTAGTATCAAT-GC-GCTCCTTGAGCTTTTTATCTTCC 937467 Query 517148 TCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAATCT 517203 || |||| | || ||| || ||| ||| || || || | || |||| || | Sbjct 937466 TCAGCAAACTTTTCAGCATCATTAACCATCCTTTCGATCTCTTCAGGTGTCAGGCGATTT 937407 Query 517204 TCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGC 517260 | ||| ||| ||||| || || || || |||||| ||| ||| || | || Sbjct 937406 T----GATCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGC 937354 Query 517261 AGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCC 517320 ||||| |||||| ||||| |||| | ||||| ||||||||||| || ||||| || Sbjct 937353 TGTCACTCGAAGAATGCCATTCACATCTATCTCAAAAGTGACTTCAATCTGTGGGACTCC 937294 Query 517321 TCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 517380 | ||||||| ||||| || || || ||| ||||||||| || ||| ||||| || Sbjct 937293 ACGGGGAGCAGGAGGGATTCCAGTCAGATCAAAAGTTCCCAGAAGATGATTGTCTTTTGT 937234 >seq1991 Length=4069235 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| || || |||| |||||||| ||||||||||| || ||| | || || ||| | Sbjct 1615253 TGTACACTTATCCTGACCGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 1615312 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || |||| |||||| ||||| |||||||| |||||||||||| | | |||||| | Sbjct 1615313 GTGGTTGGGAGAGATAGATATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 1615372 Query 635561 GATGCT 635566 || ||| Sbjct 1615373 GAAGCT 1615378 >seq435 Length=2947834 Score = 89.7 bits (98), Expect = 4e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| ||||| || ||||| ||||| ||||| ||||||||| | || || | || || Sbjct 1511763 TGTCGTAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTCAT 1511822 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| ||||| ||| | || || ||||| || || ||||||||||| || || Sbjct 1511823 TCATTATGGTGCTCCTAAGGAAATGGAGTCATATTACCAGGAGATTGGTAGAGCTGGCCG 1511882 Query 367113 TGATGGA 367119 |||||| Sbjct 1511883 CGATGGA 1511889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780698837997940