Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2363 107 1e-18
seq54 104 2e-17
seq1424 102 5e-17
seq2309 86.0 4e-12
seq446 84.2 1e-11
>seq2363
Length=646923
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || | || |||
Sbjct 186423 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCC 186364
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||||||||| || || | |||||||| | || | |||||||||||
Sbjct 186363 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 186304
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | || ||| || || | ||| ||||| ||
Sbjct 186303 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTC 186244
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| || |||||||| |||||||||||
Sbjct 186243 CGCGTCAGGGTCTTCACGAAGATCTGCAT 186215
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || | || |||
Sbjct 186651 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCC 186592
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||||||||| || || | |||||||| | || | |||||||||||
Sbjct 186591 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 186532
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | || ||| || || | ||| ||||| ||
Sbjct 186531 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTA 186472
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 186471 CCGGTCAGGGTCTTCACGAAGATCTGCAT 186443
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || | || |||
Sbjct 187098 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCC 187039
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||||||||| || || | |||||||| | || | |||||||||||
Sbjct 187038 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 186979
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | || ||| || || | ||| ||||| ||
Sbjct 186978 ATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTA 186919
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 186918 CCGGTCAGGGTCTTCACGAAGATCTGCAT 186890
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||| ||||| | | |||| ||| | ||| || ||||| ||||| ||||| ||
Sbjct 187905 CCTCCTCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 187846
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || | || |||||||| ||||||||||| || || | |||||||| | ||
Sbjct 187845 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 187786
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| ||||| |||||| | || | || | || ||| ||
Sbjct 187785 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACC 187726
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || || || || |||||||| |||||||||||
Sbjct 187725 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || | || |||||||| |||||||||||
Sbjct 186861 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAG 186802
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 186801 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 186742
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | || ||| || || | ||| ||||| || || || || ||||||||
Sbjct 186741 TCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACG 186682
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 186681 AAGATCTGCAT 186671
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || | || |||||||| |||||||||||
Sbjct 187308 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAG 187249
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 187248 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 187189
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | || ||| || || | ||| ||||| || || || || ||||||||
Sbjct 187188 TCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACG 187129
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 187128 AAGATCTGCAT 187118
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || ||| | || | || |||||||| |||||||||||
Sbjct 187641 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAG 187582
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | | |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 187581 ATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 187522
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | || ||| || || | ||| ||||| || || || || ||||||||
Sbjct 187521 TCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACG 187462
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 187461 AAGATCTGCAT 187451
>seq54
Length=460634
Score = 104 bits (114), Expect = 2e-17
Identities = 149/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||| | | ||| ||||| ||||| |||||||| || || | | ||| |||
Sbjct 180527 ACCAAGGGCAGGGTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCC 180468
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || |||| || ||||| |||||||| | || | |||||||||||
Sbjct 180467 AGCTGTTTGCCCACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGG 180408
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|| || |||||| | | || | |||| || || || | || || ||||| ||
Sbjct 180407 ATTTTAGCTTTGACATTTTCGATGGTGTCACTGG-CTGGACCTTGAGTGTGATGGTCTTG 180349
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || ||||||||||||||||||||
Sbjct 180348 CCCGTCAGGGTCTTCACAAAGATCTGCAT 180320
>seq1424
Length=2309046
Score = 102 bits (112), Expect = 5e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||| ||||| ||||| | || |||| ||||||||||| || |||||
Sbjct 23020 TCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 23079
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | || ||||| || ||||| || || ||
Sbjct 23080 ATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGCCTTCAC--AT 23137
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || || || || | ||| ||||| || || || || |||||||
Sbjct 23138 TCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 23197
Query 34969 CAAAGATCTGCATA 34982
| ||||||||||||
Sbjct 23198 CGAAGATCTGCATA 23211
Score = 96.9 bits (106), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||||||||| || || ||||| | || |||| ||||||||||| || |||||
Sbjct 22792 TCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 22851
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||||||||| | || | || ||||| || ||||| || || ||
Sbjct 22852 ATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCAC--AT 22909
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || || || || | ||| ||||| || || || || |||||||
Sbjct 22910 TCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 22969
Query 34969 CAAAGATCTGCATA 34982
| || |||||||||
Sbjct 22970 CGAAAATCTGCATA 22983
Score = 96.9 bits (106), Expect = 2e-15
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || || ||||| | || |||| ||||||||||| || |||||
Sbjct 23248 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAG 23307
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||||||||| | || | || ||||| || ||||| || || ||
Sbjct 23308 ATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCAC--AT 23365
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| | ||| || || | ||| ||||| || || || || |||||||
Sbjct 23366 TCTCAATGGTGTCACTTGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 23425
Query 34969 CAAAGATCTGCATA 34982
| ||||||||||||
Sbjct 23426 CGAAGATCTGCATA 23439
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| || || ||||| | || |||| |||||||| || || |||||
Sbjct 23476 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 23535
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | ||||||||| | || | || ||||| || ||||| || || ||
Sbjct 23536 ATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTTAC--AT 23593
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || || || || | ||| ||||| || || || || |||||||
Sbjct 23594 TCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 23653
Query 34969 CAAAGATCTGCATATT 34984
| ||||| ||||| ||
Sbjct 23654 CGAAGATTTGCATTTT 23669
>seq2309
Length=718661
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/213 (69%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||||| || ||| |||||||| || | |||||| || | | | |||| |||
Sbjct 498286 ACCAAGTACATGGTGGACTCTTTCTGGATATCATAGTCTGAGAAAGTGCAGCCATCCTCC 498345
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| | |||||| || || | |||||| | | || | ||||||||||| |
Sbjct 498346 AGCTGTTTGCAGGCAAAAATCAGACACTGCTGGCCAGGTGGGATGCCCTCCTTGTCTCGG 498405
Query 34893 ATCTTCTGTTTGACGGATGCTATC----GATTCACCGGCCTCAACATCGACGGTTATGGT 34948
|| || ||| |||| |||| | |||| | ||| || |||| || |||||
Sbjct 498406 ATTTTAGCTTT----GATGTTATCAGTGGTGTCACTGAACTCGACCTCGAGTGTGATGGT 498461
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||| | | |||||||| |||||||||||
Sbjct 498462 CTTGCCCATCACGGTCTTCACGAAGATCTGCAT 498494
>seq446
Length=6116713
Score = 84.2 bits (92), Expect = 1e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 34793 TTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATAT 34852
|||| | || |||||||| || | | || || ||||||||||| || ||||| ||
Sbjct 3276552 TTTCCGGATATTATAGTCTGAGAAAATGCGGCTATTCTCCAGCTGTTTGCCTGCAAAAAT 3276493
Query 34853 TAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGC 34912
||| || |||||||| || || | ||||||||||| || || ||||||| | |
Sbjct 3276492 TAGACGCTGCTGGTCATGTGGGATGCCCTCCTTGTCTTCGATTTTAACTTTGACGTTTTC 3276433
Query 34913 TATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972
| | ||| || ||| || |||| | ||| | || ||| | ||| ||||||||
Sbjct 3276432 AGTGGTATCAGTGGGCTCGACCTCGAGTATGATGATCTTGCCCATCAGAAAATTCACAAA 3276373
Query 34973 GATCTGCAT 34981
|||||||||
Sbjct 3276372 GATCTGCAT 3276364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324623748384720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |