Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2123 159 3e-33 seq2429 134 1e-25 seq2203 125 6e-23 seq646 123 2e-22 seq1269 113 4e-19 seq171 109 4e-18 seq2080 102 7e-16 seq1424 100 2e-15 seq1767 98.7 8e-15 seq1958 95.1 1e-13 seq558 91.5 1e-12 seq1689 86.0 5e-11 >seq2123 Length=1033990 Score = 159 bits (176), Expect = 3e-33 Identities = 399/594 (67%), Gaps = 24/594 (4%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || || | || ||||| || ||||| || || | || |||| || Sbjct 481521 GCCATTGGCATCGACCTGGGCACCACCTACTCATGTGTGGGGGTGTTCCAGCATGGCAAG 481580 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || || || ||| | || || || || || | ||||| Sbjct 481581 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCTAGCTACGTGGCCTTCACC 481640 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || ||||| | | | || ||||| || || | || ||||| || ||||| Sbjct 481641 GATACTGAGCGGCTCATCGGGGATGCCGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 481697 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| |||||| | ||||| |||| ||||||||| | || || Sbjct 481698 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGAAAATTTAATGATCCTGTAGTACAA 481757 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATAT--TG 550286 |||||||||| | ||||||||| ||| | | |||| || || ||| | | || Sbjct 481758 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCTAAGGTGCTG 481817 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAAT-TTTCA--CCAGAACAAATTTCATCTATGG 550343 | | || | |||| | ||| || |||| || ||| |||| || ||||||| Sbjct 481818 GTG-TCCT-ACAAAGGG---GAGAAAAAAGCTTTCTACCCTGAAGAAATCTCTTCTATGG 481872 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 | ||| |||||||| | || || |||||| | || || || || |||| | Sbjct 481873 TACTAACTAAAATGAAGGAGACTGCTGAGGCTTTTTTAGGCCACCCTGTCACCAATGCTG 481932 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| ||||| ||||| |||||||| ||||| || || || || ||||| || Sbjct 481933 TGATCACTGTGCCAGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTG 481992 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 ||||| || || ||||| | | |||||||||||||| || |||||||| |||| | Sbjct 481993 TGATTGCAGGTCTCAATGTGTTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCCT 482052 Query 550524 ATGGACTTGATAAA-CATAATGATCA---AGAACTTAATGTACTCATCTTTGAT 550573 |||| | |||||| || | ||| ||| | ||||||| ||||||||| Sbjct 482053 ATGGCTTAGATAAAGCA----GGTCAGGGAGAGCGACATGTACTGATCTTTGAT 482102 >seq2429 Length=579621 Score = 134 bits (148), Expect = 1e-25 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || ||||| || ||||| |||||||| || || || ||||| Sbjct 350608 GTTACAAATGCTGTGGTCACAGTACCTGCTTATTTCAATGACTCTCAGCGGCAGGCTACC 350549 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| ||| | |||||||||||||| |||||| Sbjct 350548 AAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTAGAATTATCAATGAACCAACTGCT 350489 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| |||| ||||| | |||||| Sbjct 350488 GCTGCTATTGCTTATGGCTTAGATAAA 350462 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 552468 ACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGT 552527 || || ||||| || | ||||| | ||| | | ||| || ||||||||||||||| Sbjct 349102 ACCAAGGATAACAACCTGCTTGGCAAGTTTGAGCTCACAGGCATACCTCCTGCTCCTCGT 349043 Query 552528 GGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACT 552587 || || || || |||||||| ||||| ||||||||||| ||||| || | ||||| || Sbjct 349042 GGTGTTCCTCAGATTGAAGTCACTTTTGATATCGATGCTAATGGTATACTTAATGTCTCT 348983 Query 552588 GCTTGTGATAA 552598 ||| ||||| Sbjct 348982 GCTGTGGATAA 348972 Score = 87.8 bits (96), Expect = 1e-11 Identities = 132/186 (71%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||| | || | || ||||| ||| Sbjct 351559 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGAAAAGTGGAA 351500 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| || || || ||| ||||||||||| ||| || |||| || || || Sbjct 351499 ATAATTGCCAACGACCAGGGAAACCGAACTACTCCAAGTTACGTGGCTTTTACTGATACG 351440 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 || | || | |||||||| ||||| |||||| || || || || ||||| || Sbjct 351439 GAGCGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCACCAACACGG 351382 Query 550176 TTTTTG 550181 |||||| Sbjct 351381 TTTTTG 351376 >seq2203 Length=850018 Score = 125 bits (138), Expect = 6e-23 Identities = 339/514 (66%), Gaps = 6/514 (1%) Strand=Plus/Minus Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| ||||| |||| || ||| | | ||||| ||||| || || ||||| | ||| Sbjct 409758 GATGCAAAGCTTGACAAGTCCCAGATCCATGATATTGTCCTGGTGGGTGGTTTTACCCAT 409699 Query 552147 ATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205 || ||||| |||| | || | || || ||| | ||||| ||||| || ||| | || Sbjct 409698 ATCCCTAAGATTCACAAACTTCTACAGGACTTTT---AATGGAAAAAAGTTGAATAAGAG 409642 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 | || || |||| ||||||||| |||||||| || || || ||||| || || ||||| Sbjct 409641 CATCAACCCTGATGCGGCTGTTGCTTATGGTGCAGCTATCCA-GCAGCCATCCTATCTGG 409583 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 | | | |||||| | ||| || | | || || ||||||||||||| | ||||| Sbjct 409582 AGACAAATCTGAAAATGTTCAAGATTTGCTGCTGTTAAATGTTACTCCTCTTTTCCTTGG 409523 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||| | || | || |||||| || || | |||||||| |||||| Sbjct 409522 CATGGAAACTGCTGCCAGAATCATGACTGTCCTCATTAAGCACAATACTACCATTCCTAC 409463 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || | | | || ||| || || ||||| || ||| ||| ||||| | Sbjct 409462 CAAGCAGACACAGACCTTCACTATCTACTCTGATAACCAGCCTGGTGTACTCATTCAGGT 409403 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 || ||||| || | | | || | ||| || | ||| | | ||| | | Sbjct 409402 TTATGAAGATGAGCGGGCCATGATCAAGGGTAACAACCTGCTTAGCAAGTTTGAACTCAT 409343 Query 552506 AGGTATTCCTCCT-GCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATG 552564 || | ||| || || |||||||| || || || |||||| | ||||| |||||| ||| Sbjct 409342 AGACTTACCTTCTGGCACCTCGTGGTGTTCCTCAGATTGAAATCACTTTTGATATCAATG 409283 Query 552565 CCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | ||||| || | ||||| ||||| ||||| Sbjct 409282 CTAATGGCATCCTCAATGTCTCTGCTGTGGATAA 409249 Score = 116 bits (128), Expect = 3e-20 Identities = 350/533 (66%), Gaps = 13/533 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| ||||| | || | | |||| ||| Sbjct 410428 GGCATTGATCTCGGCACCACTTACTCTTGTGTGGGTGTCTTCCAGCGTAGAGAAGTGGAA 410369 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| || | | ||| ||| | |||| ||| || | || || || | Sbjct 410368 ATAATTGCCAACAATTAGGAAAACCAAACCATTCCAAGTTAGGTGTACTTTACTGATATG 410309 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAAT----CCTACCAATAC 550173 || || || | |||||||| ||||| | |||| ||| ||| || ||||| | Sbjct 410308 GAGCAATTGATAGGTGATGCTGCAAAGAAACAAG----TGGCAATGACCCCCACCAACAT 410253 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 ||||||||| |||| | | | || || ||| ||||| | ||| || | || Sbjct 410252 GGCTTTTGATGCCAAACACCTGAATAGACATAGATTTGATGATACTGTTGTCCAATCTGA 410193 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293 |||||| ||| | || ||| | || ||| | |||| || || | | | Sbjct 410192 TATGAACCATCGCCCCTTCATGGTGGTGAATAATGCTGGCAAGCCCAAGGCCAAGTAGAA 410133 Query 550294 TCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGA 550352 | | ||||| | ||| | || | ||||| | | |||||||||||||| | | Sbjct 410132 T-ACAAAGGAGA-GACAAAAAGTTCCTATCCAGAGGAGGTGTCATCTATGGTTTTGACAA 410075 Query 550353 AAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACT 550411 | | ||| ||| || || | || | |||| |||| |||| || ||||| Sbjct 410074 AGACGAAGGAAATTGCAGAAGCCTACCTTTGG-AAGACCATTACAAATGCTGTCATAACA 410016 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 ||||| || || || |||||||| || | || || || |||||||||||| ||||||| Sbjct 410015 GTACCTGCTTACTTCAATGACTCTCAGTGGCAGGCCACCAAAGATGCTGGAATTATTGCT 409956 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 || || ||||| ||| | ||||||||||| || ||||||||||| |||| || Sbjct 409955 GGTCTCAATGTACTTAGAATTATCAATGAGCCAACTGCTGCTGCTATTGCTTA 409903 >seq646 Length=2749144 Score = 123 bits (136), Expect = 2e-22 Identities = 390/591 (66%), Gaps = 25/591 (4%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||| | ||||| || |||||| ||||| | || |||| ||| | ||| Sbjct 861328 GGCATTGATTTCAGCACCACCTAGTCTTGTGTGGGTGTCTTCCAGCATGGGAAAATGGAA 861387 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTA-CTCCATCTTATGTTTCTTTCACGGAAA- 550115 || |||| ||||||| | || ||| |||||| |||||| |||||| || || |||| Sbjct 861388 ATAATTGTCAATGATTAGGGAAACTGAACTAACTCCATGTTATGTCAACTTTACTGAAAA 861447 Query 550116 CTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATAC 550173 ||||| | | ||||||| ||||| |||||| || || || || || || || Sbjct 861448 CTGAATGCGTTATCAGTGATGCCGCAAAGAATCAAGTTGCATTG--AACCCCACTAACAC 861505 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | |||||||||| ||||| | |||| | | || ||||||||| | | | | || || Sbjct 861506 TGTTTTTGATGCCAAACGCCTGATTG-ATGTAGATTTAATGATGCTATTTTCCAATTTGA 861564 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293 |||||||||| || ||| | || |||| | ||| | || | | ||| Sbjct 861565 TATGAAGCATCATCCCTTCATGGTGGTGAATGATGTTGGTAGGCCCAAAGTCTAAG---- 861620 Query 550294 TCATGAAGGATCTGTTA-AACAATTT--TCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | ||| | | | || || || | | ||| | | || ||||| ||||| | Sbjct 861621 ---TAAAGTACAAGAGACAAAAAGTTCCTATCAAGAGGAGGTATCGTCTATTGTTTTGAC 861677 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAA 550409 || ||||| | | || | || | || | |||| ||||| |||| | || | Sbjct 861678 AAAGATGAAGGATATTGCAAAAGC-CTACTTTGAGAAGACTGTTACAAATGCTATCATCA 861736 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | |||| || || || |||||||| || |||| ||| |||||||||| | || || Sbjct 861737 CAGTACTTGCTTACTTCAATGACTCTCAGTGTCAGTTTACCAAAGATGCTGAAACTACTG 861796 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 ||| ||||| | ||| ||| ||||| | || ||||||||||| |||| || || Sbjct 861797 ATGGTCTTAACATACTTACAATTGTCAAT-AGCCAACTGCTGCTGCTATTGCTTACGGCT 861855 Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAG 550580 | |||||||| | | ||| || || || || |||||||| | |||| Sbjct 861856 TAGATAAACA----GGT-TAGAGCTGAAAGTGCTGATCTTTGACTTGGGAG 861901 >seq1269 Length=2386437 Score = 113 bits (124), Expect = 4e-19 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| ||| | || ||| ||||| ||| Sbjct 1516253 GGCATTGATCTTGGCACCACCTACTCTTGTGTGCATGTCTTTCAGCATGAAAAAGTGGAA 1516194 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| | ||| |||| || || ||||| | | || || || || Sbjct 1516193 ATAATTGCCAATGATCAGAGAAACTGAACCACCTCAAGTTATGGTGCCTTTACTGATACC 1516134 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || || ||| |||||| ||||| |||||| | | || | ||||| | || Sbjct 1516133 TAATGATTGATTGATGATGCTGCAAAGAATCAAGTCGCAATGAACCTCACCAACATGGTT 1516074 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| ||| | | |||||| || ||| ||||||| |||||| | |||||| Sbjct 1516073 TTTGATGCCAAATGCCTGATTGGACATAGATTTGATGATTCTGTTGTTCAATCTGATATG 1516014 Query 550238 AAGCATTGGCCTTTC 550252 ||||||||||| ||| Sbjct 1516013 AAGCATTGGCCCTTC 1515999 >seq171 Length=354554 Score = 109 bits (120), Expect = 4e-18 Identities = 153/211 (73%), Gaps = 9/211 (4%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||||||||| || ||| |||| ||| ||||| |||| ||| | | |||||| Sbjct 311000 CAAGATGAAGTGTGGACTCCTTTTG--AATGTTGTAGTCAG----AGTACATCCATCTTC 310947 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || || ||||| | |||||||||||||||||||||||| |||| |||| || Sbjct 310946 CAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTTCTTCCTTATTCTG 310887 Query 563385 AATTTTTTGTTTTACTGCCTCAATTG-TATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 |||||| ||||| || || | |||| | ||| | |||||||| | || | Sbjct 310886 AATTTTGGCCTTTACATTTTCTATCGTTATCTGAGTGTTCAACCTCGAGAGTGATGGTCT 310827 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || |||||||||| | |||||| ||||| Sbjct 310826 TCCCCATAAGAGTTTTTATGAAAATCTGCAT 310796 >seq2080 Length=3818131 Score = 102 bits (112), Expect = 7e-16 Identities = 100/127 (79%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| | ||| |||| |||||| | ||||| Sbjct 1111781 ACAAGATGAAGAGTGGACTCCTTTTG--AATGTCGTAGTCAGATAGAGTATGTCCATCTT 1111724 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || || |||||||||||||||||||||||||||||||| | Sbjct 1111723 CCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 1111664 Query 563384 GAATTTT 563390 | || || Sbjct 1111663 GGATCTT 1111657 >seq1424 Length=2309046 Score = 100 bits (110), Expect = 2e-15 Identities = 158/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| || || ||||| ||||| ||||| ||| ||||| |||| ||||| Sbjct 22989 CCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGT 23048 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||| || || ||||| || ||||| || || || ||||| ||||||||||| || Sbjct 23049 GCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACC 23108 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431 ||| ||||| || || || || || |||||| || ||| || | | || ||| | Sbjct 23109 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTG-GGTTCCACTTCCA 23167 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || | || || || || || || || ||||| || |||||| Sbjct 23168 GGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 23211 >seq1767 Length=1785757 Score = 98.7 bits (108), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 ||||||||||| ||| || || ||| ||||| |||| | || | | |||||| Sbjct 523807 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACATCCATCTTCC 523866 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 | |||||| | ||||| || |||||| |||||||||||||||||||||| ||||| || Sbjct 523867 AATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 523926 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 || || ||||| || |||||| | | | | | || ||||| | || || Sbjct 523927 ATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGAGTGAAGGTCTTC 523986 Query 563446 CCAG-TAAGAGTTTTAACGAAAAT 563468 || | |||| ||||| |||||||| Sbjct 523987 CCTGTTAAGGGTTTTCACGAAAAT 524010 >seq1958 Length=4156293 Score = 95.1 bits (104), Expect = 1e-13 Identities = 154/217 (71%), Gaps = 11/217 (5%) Strand=Plus/Minus Query 563265 TACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA--GT---TCTTG 563317 |||||||||||| || ||| |||| ||||||||| | ||| | || |||| Sbjct 633143 TACAAGATGAAGAGTGGACTCCTTTTG--AATATTGTAGCCGACTACAAAGTACATCTT- 633087 Query 563318 AATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTT 563377 || ||| |||| || || ||||| || ||||||||| ||||| ||||||||||||| | Sbjct 633086 -ATTTTCCAGTTACTTGCCAGCAAAGATCAGTCTTTGCCGATCAAGAGGAATTCCTTCCT 633028 Query 563378 TATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAA 563437 |||| || | || | ||| || |||||||| | | | | | |||||| | Sbjct 633027 TATCCTGGAACTTGGCCTCTACATTTTCTATTGTATCCGAGGGTTCAGCCTAGAGAGTGA 632968 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || |||||||| ||||| |||||||| ||||| Sbjct 632967 TGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 632931 >seq558 Length=2832783 Score = 91.5 bits (100), Expect = 1e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||| ||||| | ||||| || || || Sbjct 935332 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 935391 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| ||| |||||| | |||||| | | || |||||||| || Sbjct 935392 AAAGATGCTGGAACTATCGCTGGATTGAATGTTATGAGAATCATCAATGAGCC 935444 >seq1689 Length=2064527 Score = 86.0 bits (94), Expect = 5e-11 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||||||| | || | ||||| Sbjct 174763 ACGAGATGAAGAGTGGACTCCTTTTG--AATGCTGTAATCAGACAAGGTATGTCCATCTT 174820 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||||| ||||||||||||||| |||| | Sbjct 174821 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTCCTTCCTTATTCT 174880 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || |||| | | |||||||| | | |||||||||| || | Sbjct 174881 GGATCTTGGCCTTTATATCTCCTATTGTATCCAAGGCTTCAACCTCGAGAGTAATGGTCT 174940 Query 563444 TACC-AGTAAGAGTTTTAACGAAAATTTGC 563472 | || ||||| ||||| | |||||| ||| Sbjct 174941 TCCCTTGTAAGGGTTTTCAAGAAAATCTGC 174970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029164317570100