Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq552 82.4 1e-10 >seq552 Length=125766 Score = 82.4 bits (90), Expect = 1e-10 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 || ||||| || |||| || ||||||| ||| ||||||||||| || || | || Sbjct 26808 CCCTCATGCTGCACGTGGCACATGTATCTCTGCTCCTCTCCAGAAGGCACCACCACTGCC 26867 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || || || ||||| || || || | || || || |||| | || ||| Sbjct 26868 GCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCATGAGCTCCATGTCCTGA 26927 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | || || || || || || | ||| || | | | || || || || || || |||| | Sbjct 26928 GTCTGGTCCTCCCCATCACGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGA 26987 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 26988 GCCCAGCACC 26997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629263613560400