Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1989 127 2e-24
seq2095 104 2e-17
>seq1989
Length=1255173
Score = 127 bits (140), Expect = 2e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 29875 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 29934
|||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| || ||
Sbjct 654421 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCA 654362
Query 29935 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAA 29994
|| ||||| || | ||||||||||| ||||| || || ||||| || | ||| ||
Sbjct 654361 AGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAG 654302
Query 29995 AACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032
||||| || | || ||||||||||| || ||||||||
Sbjct 654301 AACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAG 654264
>seq2095
Length=1036233
Score = 104 bits (114), Expect = 2e-17
Identities = 386/599 (64%), Gaps = 36/599 (6%)
Strand=Plus/Plus
Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 29850
||||| | ||||| ||||| || || ||| || | ||| || ||| | | || ||
Sbjct 1015216 AGCTGCATTTTCAGTGGTTCAGTGTCATTCAGATAAATGTGCGCATCTTCTAAAGTATGT 1015275
Query 29851 ACAAACTCTCCCGGT-TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29909
||||| || || ||| |||| ||| ||| | |||||||| | ||| || || ||
Sbjct 1015276 ACAAAGTCATTTGGCGTCTGGCCCA-TGATGTGTGTGATCATGTA-GAGAGCAGGGAATA 1015333
Query 29910 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
|||||||||||| ||||| |||| || |||| || | | |||||||| ||
Sbjct 1015334 GCTGGCGATGTTGAAGGGCCCCCCCAGGCCCAGATCTGCTGGCCTCTGGTT-------CA 1015386
Query 29970 CGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029
|| | || ||||| || | ||| |||||| || | || || |
Sbjct 1015387 CG------------------CCTAGAACTGGCAAAGGGTATGGCACCGAAGTAGGGC--T 1015426
Query 30030 GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30088
||| ||| ||||| || ||||| |||| || |||||| | |||| || |||||
Sbjct 1015427 GAGAA--AAGATCTTTCGGTTTCCAAGCGCTCAGGATGATTCTTTTGTCATCACGGTTGG 1015484
Query 30089 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30148
| || | ||| | | ||| |||| || || || || || || || ||
Sbjct 1015485 TTTCGAACATGTCAATCACCTTTGGCAG-TGGTCTACTCCTTGACCTGAATAACCTTAAT 1015543
Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208
||| || |||| ||||| || |||||||||||| | || || || || || | ||
Sbjct 1015544 CCATATCTTTGTATTCTGCCCCAAAATGCCTCCACCGAAAGCCATAAACTAAGCCTAAGT 1015603
Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
| || |||| ||| ||| | |||||| |||||| ||| | ||||| |
Sbjct 1015604 CCCCTTCTTTTCTGCAGGAGAATTCTAGGCTGTCCAGAAAGTCATAGGACTCATTGGCAT 1015663
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAAC 30327
|||||| | || | || || || ||||| | |||||| | ||||| || |||
Sbjct 1015664 CCCAGAATCTCACTTCTTTGGATGACAGTTCTTTAGCATTTGTGTATCCCTC-GATAAAC 1015722
Query 30328 CACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
||||| | |||||||| || ||||||| || || | || || || || || |||||
Sbjct 1015723 CACAGTAACTCCTCCAAAACACCCTTCCAGAATACACGTTTAGTTGTCAGCAGAGGAAA 1015781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408605199732770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |