Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq2123 161 6e-34
seq2429 120 2e-21
seq1269 114 8e-20
seq91 107 1e-17
seq558 93.3 3e-13
seq1424 91.5 1e-12
seq2080 87.8 1e-11
>seq2123
Length=1033990
Score = 161 bits (178), Expect = 6e-34
Identities = 370/552 (67%), Gaps = 4/552 (1%)
Strand=Plus/Plus
Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383
|||| || ||||| || || | || || || ||| ||||| | || | || |||
Sbjct 481516 GAATGGCCATTGGCATCGACCTGGGCACCACCTACTCATGTGTGGGGGTGTTCCAGCATG 481575
Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443
| || || || || || ||||| ||||| || || | || || || || || | |
Sbjct 481576 GCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCTAGCTACGTGGCCT 481635
Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503
| || || ||||| | || || || ||||| || || | || | || |||||
Sbjct 481636 TCACCGATACTGAGCGGCTCATCGGGGATGCCGCCAAGAACCAGGTAGCCATGAATCCCC 481695
Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563
|| ||| | |||||||| ||| | ||||||| | || ||| ||||| | || |
Sbjct 481696 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGAAAATTTAATGATCCTGTAGTAC 481755
Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAG 474623
|||| |||||| | |||||||||| | || || |||| || || || || | | |
Sbjct 481756 AATCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCTAAGGT-G 481814
Query 474624 AAGCAATAC-ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682
| | | || ||| || | ||| || | || ||| |||| ||||| |||||
Sbjct 481815 CTGGTGTCCTACAAAGGGGAGAAAAAAGCTTTCTACCCTGAAGAAATCTCTTCTATGGTA 481874
Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741
|| | |||||||| | || || ||| | | | | || || || || |||| ||
Sbjct 481875 CTAACTAAAATGAAGGAGACTGCTGAGG-CTTTTTTAGGCCACCCTGTCACCAATGCTGT 481933
Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801
|| ||||| ||||| ||||| ||||| |||||||| || || || || ||||| ||
Sbjct 481934 GATCACTGTGCCAGCCTATTTCAATGACTCTCAACGCCAGGCCACCAAGGATGCAGGTGT 481993
Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861
||||||||||| ||||| ||| | ||||| |||||||| ||||| || || |||| ||
Sbjct 481994 GATTGCAGGTCTCAATGTGTTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCCTA 482053
Query 474862 TGGTCTTGATAA 474873
||| | |||||
Sbjct 482054 TGGCTTAGATAA 482065
>seq2429
Length=579621
Score = 120 bits (132), Expect = 2e-21
Identities = 324/489 (66%), Gaps = 14/489 (3%)
Strand=Plus/Minus
Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399
|||||||| ||||| || | | | |||||||| || | || | ||||| |||||
Sbjct 350295 GAAGATGGAATTTTCGAAGTGAAATCTACAGCTGGGGACACCCACTTAGGTGGAGAAGAC 350236
Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAA--AGT 475455
||||| || || | || | ||| | | ||| ||| || ||| | || |||| ||
Sbjct 350235 TTTGACAACCGAATGGTCAACCAT--TTTATTGCAGAGTTTAAGCGCAAGCATAAGAAGG 350178
Query 475456 TGATCTTTCAACATCTGCTAAAG--CATTAAGACGTCTTAGAACTGCTTGTGAACGTGCT 475513
||| | | | | |||| | | |||||||| | ||||||||||||||||||
Sbjct 350177 ACATCAGTGAGAA----CAAAAGGGCTGTCAGACGTCTCCGCACTGCTTGTGAACGTGCT 350122
Query 475514 AAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGA 475573
||||| | |||||||| ||| || | | | |||| ||||||| || | |||||||
Sbjct 350121 AAGCGTACCCTTTCTTCCAGTACCCAGGCCAGTATTGAGATTGATTCGCTCTATGAAGGA 350062
Query 475574 ATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTT 475633
|| || | |||| ||| || | || ||||||||| | | |||| || ||
Sbjct 350061 ATCGACTTCTATACCTCTATCACTCGTGCCCGATTTGAAGAATTGAATGCTGACCTTTTC 350002
Query 475634 AGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAA 475693
| || | || || || ||| ||| || | ||| | || || ||||| || ||
Sbjct 350001 CGTGGCACCCTGGACCCTGTAGAAAAAGCCCTTCGGGATGCGAAGCTCGACAAGTCCCAG 349942
Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753
||||||| ||||| || || || ||||| || | || || || || ||||| |
Sbjct 349941 ATCCATGATATTGTCCTGGTGGGTGGTTCTACCCGTATCCCTAAGAT-TCAGAAACTTCT 349883
Query 475754 TCATCA-TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGC 475812
|| | | || ||||| ||| | || ||| | || | || |||||||||||||| ||
Sbjct 349882 ACAGGACTTCTTCAATGGAAAAGAATTGAATAAGAGCATCAACCCTGATGAAGCTGTCGC 349823
Query 475813 ATATGGAGC 475821
||||| ||
Sbjct 349822 TTATGGTGC 349814
Score = 102 bits (112), Expect = 5e-16
Identities = 125/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110
|| || ||||| ||| ||||| | ||| | || ||| || ||||||||||| |
Sbjct 349102 ACCAAGGATAACAACCTGCTTGGCAAGTTTGAGCTCACAGGCATACCTCCTGCTCCTCGT 349043
Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170
|| |||||||| |||||||| ||||||||||| ||||| |||||||| |||||||| ||
Sbjct 349042 GGTGTTCCTCAGATTGAAGTCACTTTTGATATCGATGCTAATGGTATACTTAATGTCTCT 348983
Query 476171 GCTTGTGATAA-ATCTAGTAACAAGAGTAAAAATATAACTATTACAAA 476217
||| ||||| | | | | ||||| || || || ||||| || ||
Sbjct 348982 GCTGTGGATAAGAGCACGGGAAAAGAG-AACAAGATTACTATCACTAA 348936
Score = 98.7 bits (108), Expect = 6e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794
|||| || | || || || || ||||| ||||| ||||| || || || || |||||||
Sbjct 350601 ATGCTGTGGTCACAGTACCTGCTTATTTCAATGACTCTCAGCGGCAGGCTACCAAAGATG 350542
Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854
| |||| ||||| ||||| ||||| | | ||||| ||||||||||| || || ||
Sbjct 350541 CTGGAACTATTGCTGGTCTCAATGTACTTAGAATTATCAATGAACCAACTGCTGCTGCTA 350482
Query 474855 TTGCTTATGGTCTTGATAAGAA 474876
|||||||||| | ||||| ||
Sbjct 350481 TTGCTTATGGCTTAGATAAAAA 350460
Score = 93.3 bits (102), Expect = 3e-13
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387
|||| |||| |||||| | || || || ||| ||||| | ||| | || | || ||
Sbjct 351566 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGAAA 351507
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| |||||||||||||| ||||| || || |||| || ||| || || |||||||
Sbjct 351506 AGTGGAAATAATTGCCAACGACCAGGGAAACCGAACTACTCCAAGTTACGTGGCTTTTAC 351447
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493
||| || || | | || || |||||||| || |||||| ||||
Sbjct 351446 TGATACGGAGCGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCA 351401
Score = 87.8 bits (96), Expect = 1e-11
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 290842 AGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATC 290901
||| || ||||||||||| |||||||| | ||||| ||||| ||||| || | | |||
Sbjct 350486 AGCAGCAGTTGGTTCATTGATAATTCTAAGTACATTGAGACCAGCAATAGTTCCAGCATC 350545
Query 290902 TAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTTT 290959
| || ||||| || || | ||||| ||||||||||| ||||| | ||||| |||
Sbjct 350546 TTTGGTAGCCTGCCGCTGAGAGTCATTGAAATAAGCAGGTACTGTGACCACAGCATTT 350603
>seq1269
Length=2386437
Score = 114 bits (126), Expect = 8e-20
Identities = 185/266 (70%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387
|||| |||| |||||| | || || || ||| |||||| ||| | || ||| ||
Sbjct 1516260 TGCAGTTGGCATTGATCTTGGCACCACCTACTCTTGTGTGCATGTCTTTCAGCATGAAAA 1516201
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||||||||||||||| || | || |||| || || |||| | | |||||
Sbjct 1516200 AGTGGAAATAATTGCCAATGATCAGAGAAACTGAACCACCTCAAGTTATGGTGCCTTTAC 1516141
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
||| || || | |||| |||||||| || |||||| ||| || | ||
Sbjct 1516140 TGATACCTAATGATTGATTGATGATGCTGCAAAGAATCAAGTCGCAATGAACCTCACCAA 1516081
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
| |||||||||| ||| | ||||||| | || ||||||||| | ||| |||||
Sbjct 1516080 CATGGTTTTTGATGCCAAATGCCTGATTGGACATAGATTTGATGATTCTGTTGTTCAATC 1516021
Query 474568 TGATATGCGTCATTGGCCTTTTAAGG 474593
||||||| |||||||| || ||||
Sbjct 1516020 TGATATGAAGCATTGGCCCTTCAAGG 1515995
>seq91
Length=3235863
Score = 107 bits (118), Expect = 1e-17
Identities = 195/283 (69%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383
||| |||| |||| |||||| | | || |||||| |||||| ||||| | ||| | |
Sbjct 2257805 GAACTGCAGTTGGCATTGATCTCAGCACCACTTACTCTTGTGT-GCTGTCTTGCAGCAAG 2257863
Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443
| ||||| ||||||||||||| ||| || || || |||| || ||| || | | |
Sbjct 2257864 G-AAAGTGGAAATAATTGCCAGTGATCAGGGAAACTGAACCACCCCAAGTTACTTGGCCT 2257922
Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503
||||||| || || || | || || |||||||| || |||||| || | | ||
Sbjct 2257923 TTACTGATACCGAGCAGTTGATGGGTGATGCTGCAAAGAATCAAGTTGTAATGGACCCCA 2257982
Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563
|| | |||||||| || | ||||||| | || ||||||||| | ||||
Sbjct 2257983 CCAACATGGCTTTTGATGTCCAATGCCTGATTGGGCATAGATTTGATGATGCTGTTGTCT 2258042
Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGG 474606
||||||||||| || || || ||| |||| | | || |||
Sbjct 2258043 AATCTGATATGAAACACTGACCCTTTGTGGTGGTGACTGATGG 2258085
>seq558
Length=2832783
Score = 93.3 bits (102), Expect = 3e-13
Identities = 205/304 (67%), Gaps = 4/304 (1%)
Strand=Plus/Plus
Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110
|| ||||| ||| | || ||||||||| |||| || || |||||||||||| |
Sbjct 937234 ACAAAAGACAATCATCTTCTGGGAACTTTTGATCTGACTGGAATCCCTCCTGCTCCCCGT 937293
Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170
||||| || || |||||||| |||||||| || |||| ||||| |||||| || ||
Sbjct 937294 GGAGTCCCACAGATTGAAGTCACTTTTGAGATAGATGTGAATGGCATTCTTCGAGTGACA 937353
Query 476171 GCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGA 476230
||| || ||| || ||| | || || || || ||||| || ||| | |
Sbjct 937354 GCTGAAGACAAAGGTACAGGCAACAAAAATAAGATCACAATTACCAATGATCAAAATCGC 937413
Query 476231 TTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCTGAT 476290
| || ||| | || || | |||||| |||| || || |||||| || | |||
Sbjct 937414 CTGACACCTGAAGAGATCGAAAGGATGGTTAATGATGCTGAAAAGTTTGCTGAGGAAGAT 937473
Query 476291 AACAAGAGAAA--AGCTGCTATTGATGCAAAGAATGAACTTGAAAATTATGTTCATAGTG 476348
|| ||| || ||| || |||||| | | |||||| | |||| ||||| | || |
Sbjct 937474 AAAAAGCTCAAGGAGC-GC-ATTGATACTAGAAATGAATTAGAAAGTTATGCTTATTCTC 937531
Query 476349 TAAA 476352
||||
Sbjct 937532 TAAA 937535
Score = 89.7 bits (98), Expect = 3e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 475877 GTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACT 475936
||||| |||| || ||| ||| || | ||| ||||||| |||||||| | |||||
Sbjct 936607 GTACTGCTTGATGTGTGTCCGCTTACACTTGGTATTGAAACTGTTGGAGGTGTCATGACC 936666
Query 475937 AATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTAT 475996
|| || ||| ||| || ||| | || ||| || ||| || | ||||| || |
Sbjct 936667 AAACTGATTCCCAGGAACACTGTGGTGCCCACCAAGAAGTCACAAATCTTTTCTACAGCT 936726
Query 475997 TCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGA 476040
|||||||||||| ||||||| || ||| || | | |||||||||
Sbjct 936727 TCTGATAATCAACCAACTGTTACAATCAAAGTTTATGAAGGTGA 936770
>seq1424
Length=2309046
Score = 91.5 bits (100), Expect = 1e-12
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
||||| || || ||||| || || ||||| || || || |||| ||||| | |
Sbjct 22993 AGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGG 23052
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
||| || || || || || ||||| || || | || || ||||||||||| ||||||
Sbjct 23053 CCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCC 23112
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734
|| || || ||||| || ||| ||||| || ||| || || ||| |||||
Sbjct 23113 TTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTG 23172
Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| || ||||| ||||| || ||
Sbjct 23173 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTG 23207
>seq2080
Length=3818131
Score = 87.8 bits (96), Expect = 1e-11
Identities = 100/128 (78%), Gaps = 6/128 (5%)
Strand=Plus/Minus
Query 480564 ACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT-ATCT 480620
||||||||||| || ||| |||| ||| | || |||| |||||| ||| ||||
Sbjct 1111781 ACAAGATGAAGAGTGGACTC-CTTTTGAATG-TCGTAGTCAGATAGAGTA-TGTCCATCT 1111725
Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680
|| |||||||| |||||||| || || | ||| |||||||||||||||||||| || ||
Sbjct 1111724 TCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCTTTATCC 1111665
Query 480681 TGAATCTT 480688
|| |||||
Sbjct 1111664 TGGATCTT 1111657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268072391818520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |