Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq1837 324 2e-83
seq1719 159 4e-34
seq391 116 4e-21
seq2268 87.8 2e-12
>seq1837
Length=1607474
Score = 324 bits (358), Expect = 2e-83
Identities = 672/993 (68%), Gaps = 17/993 (2%)
Strand=Plus/Minus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
|||| || || || |||| |||||||| ||| || | ||| | |||| ||| || |||
Sbjct 104348 TGTCTCAAGTGCTCATCCAAACATTGGATGGCAAAGAGGTCGATGTCTGTGTCAAACTTA 104289
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || || | ||||| || || || ||||||| || ||| || | || || ||
Sbjct 104288 TTGGCAAATAAGTGGTGC---TTGTGCAGTATCCAGTTCAAGTCACCTGCTCCAAAAACA 104232
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
|| ||||| |||| || || || ||||| || ||||| | || || || | || ||
Sbjct 104231 CACACGGAGCGTACATGGACACCATTGCAGGGTGGGTAGGGGGCGCCCTTGGAAACATCG 104172
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
||||| ||||||||||||| |||||||| || || || |||||||||| |||| ||
Sbjct 104171 CCTTCAAAGTACTGCCACTTGACAAACCTAGCGATTGCAAGCATGTCGGACATGTCATAC 104112
Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346
|| || | | ||| | | || || || | || || | ||| | |||||||| ||
Sbjct 104111 TTATAGTTTAAGGGCAGTGAGCCTGGGACTTCAGGGATCCTCTGAATAGTGGCCCAGAGA 104052
Query 160347 TGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCC 160406
| || || |||||||||||||| || | ||| ||||| |||| | |||| || ||
Sbjct 104051 TACTCATCTGGGCTGTACGTGTCTTTTGCCCACTCCATAAACTTTTGGATT---CTTTCA 103995
Query 160407 CGC---AGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463
| || |||| || || || | || || || || || ||||| || ||
Sbjct 103994 TTCTCTAGTACGTACTCCACATAATTCCTACTGACCACGAAATAGGCACTGCCTGAAAAC 103935
Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTT 160522
| ||| | | ||| || ||| ||| ||| || ||||| | || | ||| ||
Sbjct 103934 AGAGGTGTTTCAAGAGGAGG-GTGCATTTTGTCAGTCCCTGTGTTTGTCAGCTTTCCATT 103876
Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582
|| | | | |||| |||||||| | || || | | |||||| || || ||
Sbjct 103875 AACAACTGTATAATGCTTTTTCCACCTTTCTATTTTATTGGATGGCATTTTCTCAGTTTC 103816
Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642
||| |||| | || | || || || | | |||| || || ||||| || || |
Sbjct 103815 TAGGTTGTTTTCTCCCATTAATGACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAAT 103756
Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702
||||| || |||| || | ||||||| ||||||||| || || |||| || ||
Sbjct 103755 AGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTCTGTAGAG 103696
Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762
|||| ||| || || | || ||||| || || ||||| || || ||||| || ||||
Sbjct 103695 GTCCTGCATACAGTTGAGGTCGGCCTGGACCCGACTCCATGATGCATACACCACACTCTC 103636
Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAG 160819
|| | ||||||||||||||| |||| |||||| || | || || |||| | ||||
Sbjct 103635 CAGCTGACTGGCCACAAAGACATTATTGAAACAGGATGCAATGCCAATCACCGCAGCCAA 103576
Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879
|||| | ||| || | ||| |||||| || | |||||| | ||||||||| ||
Sbjct 103575 AAAGGA-ATC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATTCTGAGGCATATA 103519
Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939
||||||||| || | ||| || | ||| || || || ||||| | ||| || || || ||
Sbjct 103518 GATGGCCCTCAGGAGCCTGTCAAGCATTTCGATTTTGTGATGAACCACTATGGAATATGC 103459
Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999
||| |||||||| | ||| || ||| |||| | | ||||| ||| | |||||
Sbjct 103458 TATTGGAAACTCTGCCTCTTCCTTACTAAGGGGTTCTACAATATACTTGCGCCTTTTGAT 103399
Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032
||| || |||||| |||||||| |||||
Sbjct 103398 GAAAGAAGTACAATCATTAGTCATGTTTATATA 103366
>seq1719
Length=1953405
Score = 159 bits (176), Expect = 4e-34
Identities = 216/301 (72%), Gaps = 0/301 (0%)
Strand=Plus/Plus
Query 168169 TTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCCTTCGTCCT 168228
|||| || || || || || || || || |||||||||||| || | || || || || |
Sbjct 1467536 TTCCTGAGATTTTCCCAGAACCAAAAGTATTGAAGAGGCACTTGTAACACCCCTCATCAT 1467595
Query 168229 CCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGTTATGTTCA 168288
||| || |||||||| || || | |||||| | |||| |||| || || ||||| |
Sbjct 1467596 CCAACGTAGTATTCCAGAAGGTAATGGTTGAGCTCTGGAGTCCCAGCTCAGTGATGTTTA 1467655
Query 168289 CACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGTGGCCATGT 168348
||| ||||| | || || || ||||| || ||||||| ||||||||| |||||||
Sbjct 1467656 TCTTATCCTTATAGGCAGTCTGGACCACAACTCCATGGTTCTTGCTGAAGGTAGCCATGT 1467715
Query 168349 TCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTTATCGGTCT 168408
| || ||||| || || || |||||||| || || |||| ||| || | || |
Sbjct 1467716 TTTCTGGGCTTACAGCTTTGATTTTCTGCCATGTCACAATCAAAACTTCATGGGAAGTTT 1467775
Query 168409 GCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATCTTGAGTTACGA 168468
||| || |||| | ||||| || ||||||||||| |||| |||||| | || || |
Sbjct 1467776 CCAGAGAGCATCGTAAGGAAGCAGGTGTGTTCAGCAGCTCTCTTTCATCTCGGGTCACCA 1467835
Query 168469 C 168469
|
Sbjct 1467836 C 1467836
>seq391
Length=2997115
Score = 116 bits (128), Expect = 4e-21
Identities = 349/532 (66%), Gaps = 22/532 (4%)
Strand=Plus/Plus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| ||| |||| |||| || |||| |||||| | ||||| ||||||| | || |
Sbjct 521449 AGATACTTTGCTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATAAATGAATCTGCT 521508
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || |||||||| |||| ||| || || || | ||| || ||||| | | ||
Sbjct 521509 GGAATATAATTTTCATAGTTTTCTCTAGATGGCCCCAGAACAATAGGTACAGAGCCAGCC 521568
Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411
| || | ||||| |||||||| |||||| || |||| ||||||||||| || |
Sbjct 521569 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCGAAGGAA 521628
Query 176412 AAATAGAACTTACATGAGCCTAACAATGGT----ATTAGGTCCGGAT--TGGAGATGTGG 176465
| |||||| || || | || ||||| |||| | || | | || |
Sbjct 521629 AGATAGAATTTGCAAG----TAGATATGGTAGGAATTAAATTTTTATCATTCACATAT-- 521682
Query 176466 TTTCCAACAGCATTGCCGTATACGTGTNNNNNNNNATATTTTTG--TAACTCCATGTAAT 176523
| ||||| || ||||| ||| || | ||| ||||| |||||| ||||||
Sbjct 521683 TCTCCAAATGC-TTGCC-CATAAGTATGGATTTCAATACTTTTGCTTAACTCATTGTAAT 521740
Query 176524 ATTGCGATCTGACGTAATCTGGGTTCCAATTGCTTACTACCCAACATATGAGTTTATCCT 176583
| | ||| | | || |||||||| || ||||| ||||| || | | || || |
Sbjct 521741 ACTTGACCCTGGCATGCTCAGGGTTCCAGTTACTTACAACCCAGCAAACCAACTTCTCTT 521800
Query 176584 TTTGTGGGATCCGTGATGTAGTGGTAGTATTTTTAATAA---TCAATGAACCATAAGGTA 176640
| ||| | | | | | | | |||| | | | |||| | |||||||| |
Sbjct 521801 TGCTTGGCA--CTTCAAACA-CGAACGGATTTGTGCTCACCGTCAAGAAGCCATAAGGCA 521857
Query 176641 CAGTGATATCTGAATCCTGTCTATAAGTTACTGTAATATTAAAGAGATGTTCCAAATCTA 176700
| ||||||||| || | | |||||| | || | || || ||||| || | | |
Sbjct 521858 CTTGGATATCTGAGTCGCGGCGATAAGTCAGAGTCAGGTTGAACAGATGCTCAATACCAC 521917
Query 176701 TCTTTTTAGGACTGTTACTGGGGGATTCAAAATTTATCCAGATCCATTTTTG 176752
|||||| || ||| | | || ||||| ||||| ||||| |||||||| ||
Sbjct 521918 TCTTTTGGGGCGTGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTG 521969
>seq2268
Length=6398370
Score = 87.8 bits (96), Expect = 2e-12
Identities = 190/284 (67%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156
||| || || || || |||||||| || |||||| || ||||| |||| ||| || |
Sbjct 2179870 GTCAAACTTGTTGGCCAACAGATGATG---GTTCTGAAGAATCCAATGCAGGTCCCCAGC 2179926
Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216
||| | | |||| | || ||| | ||| |||||| | || | || || |
Sbjct 2179927 CCCATAAATACAGATAGCCCGCTGGTGGATCCCGGAGCAAGGGGCATAAGGTGCCCCCAT 2179986
Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276
|| || ||||| | | || |||||| || | |||||| || || |||||| ||
Sbjct 2179987 GCTGACATCTCCTTCATGGCCCTCCCACTTGACCAGCCTGGCAATGGCAGCCATGTCTGA 2180046
Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGT 160336
| || |||||| ||||| | || || | | ||| |||||| |||||
Sbjct 2180047 GAAGTGATATTTGGGGTGGTAAGGAACAGAGCCAGGCATCCAGGGTGCACGCTGAAGGGT 2180106
Query 160337 GGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATT 160380
|||||| |||||||| |||||||| || ||||| || | |||||
Sbjct 2180107 GGCCCAAAGGTGTTCATCGGGGCTATAAGTGTCTTTTGCCCATT 2180150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577201234052400
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