Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1841 82.4 9e-11 >seq1841 Length=1603521 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || || ||||| ||||| ||||| ||| | ||||| |||||| Sbjct 624287 TCTCAGACCGAGACAGGTACCCCATACATGCTCTACAAAGATTCCTGTAATCGGAAGAGC 624228 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| | || ||||||||||||| || || || || || ||||| ||||||| Sbjct 624227 AACCAGCAAAACCTGGGAACAATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTAT 624168 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 624167 ACCAGCAAAGATGAG 624153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596551031771200