Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1767 98.7 2e-15
seq2363 91.5 3e-13
seq1424 91.5 3e-13
>seq1767
Length=1785757
Score = 98.7 bits (108), Expect = 2e-15
Identities = 145/204 (71%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211
|| ||||| | |||| ||| || ||| || ||||| || || || | ||| ||
Sbjct 523807 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACATCCATCTTCC 523866
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
|||||||| | ||||| || | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 523867 AATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 523926
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| |||| |||| || ||| | || | ||||| || ||||| | || ||
Sbjct 523927 ATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGAGTGAAGGTCTTC 523986
Query 193332 CCTGTT-AGCGTTTTTACAAATAT 193354
|||||| || ||||| || || ||
Sbjct 523987 CCTGTTAAGGGTTTTCACGAAAAT 524010
>seq2363
Length=646923
Score = 91.5 bits (100), Expect = 3e-13
Identities = 164/240 (68%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 193121 AGTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAAT 193180
|| || ||| | ||| |||||||| ||||| ||||| |||| || | ||| || ||
Sbjct 187918 AGGAACTTAGACACCTCCTCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGAT 187859
Query 193181 ATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTG 193240
|| |||||||| | || | || || | || ||||||||||| || | |||||
Sbjct 187858 GTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTG 187799
Query 193241 TTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATC 193300
|| ||||| || || ||||| || ||||| || |||| || | || || || ||
Sbjct 187798 CTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC 187739
Query 193301 GGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| | ||| || || || || || || ||||| || || || || || || || |||||
Sbjct 187738 GCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
>seq1424
Length=2309046
Score = 91.5 bits (100), Expect = 3e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| || || |||||||||| || | ||| || ||| || || ||
Sbjct 23437 ATACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCA 23496
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | ||| || | || || || ||||| || | ||||| || || |||
Sbjct 23497 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGA 23556
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || |||| |||| ||| || || || | ||
Sbjct 23557 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCC 23616
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || || || || || || || || || || || || |||||||||||
Sbjct 23617 ACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899626398256800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |