Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1767 109 1e-18 seq1689 95.1 2e-14 >seq1767 Length=1785757 Score = 109 bits (120), Expect = 1e-18 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 523788 ACCACCATAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 523846 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | |||| ||||||||||| |||||||||| | ||| | |||||||| | Sbjct 523847 ACAAGGTACATCCATCTTCCAATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAG 523906 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| | | | || | ||| | Sbjct 523907 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAA 523966 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAA-TGTTTTAATAAATATCTGCA 192535 | || ||||| | ||| || || ||||| ||||| | || |||| || Sbjct 523967 CCTCAAGAGTGAAGGTCTTCCCTGTTAAGGGTTTTCACGAAAATCTCCA 524015 >seq1689 Length=2064527 Score = 95.1 bits (104), Expect = 2e-14 Identities = 166/238 (70%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 192305 TAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAA 192363 ||| | |||| | ||| | || || | ||| | ||| | ||| ||| || || | ||| Sbjct 174740 TAACATCACCACAAAGTCTCAACACGAGATGAAGAGTGGACTCCTTTTGA-ATGCTGTAA 174798 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||||| || || || |||| |||| ||| || ||||||||||| | ||| || |||| | Sbjct 174799 TCAGACAAGGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATGA 174858 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || |||||||| |||| || || || |||| || ||| | ||| | | | Sbjct 174859 GGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTATATCTCCTATTGTATCCAAGGCT 174918 Query 192484 TCTACTTCTAGAGTAATGGTTTTACC-AGTTAATGTTTTAATAAATATCTGCATTTTA 192540 || || || ||||||||||| || || || | ||||| | || |||||| | ||| Sbjct 174919 TCAACCTCGAGAGTAATGGTCTTCCCTTGTAAGGGTTTTCAAGAAAATCTGCGTCTTA 174976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984448592011500