Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq2123 199 3e-45
seq2429 125 5e-23
seq2203 116 3e-20
seq558 107 1e-17
seq1991 102 6e-16
seq435 86.0 5e-11
>seq2123
Length=1033990
Score = 199 bits (220), Expect = 3e-45
Identities = 914/1431 (64%), Gaps = 18/1431 (1%)
Strand=Plus/Minus
Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484
||| || ||||| |||||||| |||||||| | ||||| || ||||| || ||||| ||
Sbjct 482975 GGCCGTTACATTGAGAATACCGTTGGCATCGATGTCAAAGGTTACTTCGATCTGAGGAAC 482916
Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544
||||| | ||||| ||||| || || | ||| ||||| ||| || || |
Sbjct 482915 TCCTCTAGGTGCAGGAGGGATTCCAGTCAGGTCAAAGCGCCCCAGCAGATTGTTGTCCCT 482856
Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604
|| | | || ||||| | | ||||| || ||| || |||||||| ||
Sbjct 482855 CGTCATGGCCCTCTCGCCCTCATACACCTGGATCAATACCCCAGGCTGGTTATCTGAGTA 482796
Query 281605 AGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663
||| || || | |||| | | || || || || | ||| | | ||| | |
Sbjct 482795 AGTGGTGAAGA-TCTGTGTCTGCTTGGTGGGGATGGTGGAGTTGCGCTTAATTAGGACCG 482737
Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723
|||| | ||| || ||||| || || || | || | |||| ||||| | | | |
Sbjct 482736 TCATCACACCCCCGGCTGTCTCCAACCCTAAGGACAAGGGAGCCACATCTAACAAAAGCA 482677
Query 281724 TATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCAT 281783
| || | ||||| | | || | | ||| ||||| || | ||||| ||||
Sbjct 482676 GGTCCTGTACCTTTTCGGACTTGTCCCCCATCAAAATGGCTGCCTGTACTGCAGCCCCAT 482617
Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTG 281843
| || || || ||||| || || | | | || || | ||||| || | |
Sbjct 482616 AGGCCACTGCCTCATCTGGGTTGATGCTCTTGTTGAGATCACGGCCATTAAAGTAGTCCT 482557
Query 281844 AAAGAAGTTGTCTTA-CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902
|| || ||| | ||||||| || || | || ||||| ||||| ||||| |||||
Sbjct 482556 GCAGCAGCC-TCTGAACCTTAGGGATGCGGGTAGAGCCTCCTACTAAAACAATGTCATGA 482498
Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962
| | | |||||||| || | ||| | | | || || || || || ||| |
Sbjct 482497 ATTTTAGCTTTATCCATCTTGGCATCACGAAGAGCCTTCTCCACAGGCTCCAGAGTGCCC 482438
Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 282020
|| |||| |||| ||| | || || || ||||| |||| | || | || || |
Sbjct 482437 CTGAACAGATCTGCACACAACTCCTCAAACCGGGCTCTGGTAATGG--ACGTGTAGAAGT 482380
Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080
|||||||||| || | ||||| | ||| | | | ||||| || || || | |
Sbjct 482379 CAATTCCTTCAAAAAGTGAATCGATTTCCAAGTTGGCCTGAGTGCTGGATGACAGGGTCC 482320
Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTGCTGATTGATTCAA 282138
|| || | ||||| || || | || | | | ||| ||| | ||| | |
Sbjct 482319 TCTTGGCCCTCTCACAGGCAGTTCGCAGCCGCCTCACAGCTCGCTTGTT--TTGGCTGAT 482262
Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198
|| | || | || |||||||| ||||| ||| | | || || | || |||||
Sbjct 482261 GTCCTTCTTGTGCTTCCTCTTGAACTCTTCCACAAAGTGACTCACCAGTCTGTTGTCAAA 482202
Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258
|| || || ||||| | || | || | || || |||| | |||| ||||| ||
Sbjct 482201 GTCCTCTCCACCCAAGTGGGTGTCCCCAGCTGTGGCCTTTACCTCAAAAATCCCATCATC 482142
Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TCA 282317
| | || | | |||||| || || ||||||| |||||| || ||||||| ||
Sbjct 482141 TATGGTCAGGATGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGTACATGTCG 482082
Query 282318 TT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
| || || | || ||| | | ||| ||||| |||| |||||||| || ||||||||
Sbjct 482081 CTCTCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGGTTCATTG 482024
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|||||||| || ||||| ||||| ||||| |||||||| || ||||| || | |||
Sbjct 482023 ATAATTCTTAACACATTGAGACCTGCAATCACACCTGCATCCTTGGTGGCCTGGCGTTGA 481964
Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496
|| || || ||||| || || ||||| || || |||| || || | || | | ||
Sbjct 481963 GAGTCATTGAAATAGGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCTAAAAAA 481904
Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556
|| || || | ||||||||| ||| | ||| || || |||| ||| || | | |
Sbjct 481903 GCCTCAGCAGTCTCCTTCATTTTAGTTAGTACCATAGAAGAGATTTCTTCAGG-GTAGAA 481845
Query 282557 TGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 282615
|||| | || || || || || | | || || || |||| || ||
Sbjct 481844 AGCTTTTTTCTCCCCTTTGTAGGACACCAGCACCTTAGGCTTGCCTCCTTCATTGATTAC 481785
Query 282616 TTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAAT 282675
|| ||| |||||| ||||||||||||||| || | |||||||| | ||| |||||
Sbjct 481784 TTGAAAAGGCCAAAGTTTCATATCTGATTGTACTACAGGATCATTAAATTTTCTGCCAAT 481725
Query 282676 TAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGC 282735
| ||||| |||||||| | ||| || ||||| | || | || | ||||| ||
Sbjct 481724 CAGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCTACCTGGTTCTTGGCGGC 481665
Query 282736 ATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACC 282795
||| || || || | || || || || || | || || || || ||||| || ||
Sbjct 481664 ATCCCCGATGAGCCGCTCAGTATCGGTGAAGGCCACGTAGCTAGGGGTGGTGCGGTTGCC 481605
Query 282796 TTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846
|| || || || || || || || || |||| || | || || |||||
Sbjct 481604 CTGGTCGTTGGCGATGATCTCCACCTTGCCATGCTGGAACACCCCCACACA 481554
>seq2429
Length=579621
Score = 125 bits (138), Expect = 5e-23
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|||||||| | ||||| |||| ||||||||||||||||||||| |||||||| | |||
Sbjct 350460 TTTTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATAATTCTAAGTACA 350519
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| ||||||||||| |||| |||||||| || || || | || || || || |||||
Sbjct 350520 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGCCGCTGAGAGTCATTGAAATAA 350579
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480
||||| || || | || |||| ||| ||
Sbjct 350580 GCAGGTACTGTGACCACAGCATTTGTAAC 350608
Score = 120 bits (132), Expect = 2e-21
Identities = 363/552 (66%), Gaps = 14/552 (3%)
Strand=Plus/Plus
Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836
|||||||| || |||||||||||||| || | | | ||| | || ||| ||||||||
Sbjct 349814 GCACCATAAGCGACAGCTTCATCAGGGTTGATGCTCTTATTCAATTCTTTTCCATTGAAG 349873
Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895
|| | ||||||| ||| | |||||| ||||| | || || || || | |||||
Sbjct 349874 AAGTCCTGTAGAAGTT-TCTGAATCTTAGGGATACGGGTAGAACCACCCACCAGGACAAT 349932
Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955
||||| | ||| || || || || || | |||| | ||||||| || || || ||
Sbjct 349933 ATCATGGATCTGGGACTTGTCGAGCTTCGCATCCCGAAGGGCTTTTTCTACAGGGTCCAG 349992
Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015
| | || | ||| | | | |||||| ||| || | ||| | || | ||
Sbjct 349993 GGTGCCACGGAAAAGGTCAGCATTCAATTCTTCAAATCGGGCACGAGTGATAGAGGTATA 350052
Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075
| || |||||||| | | ||||||| ||||| | | || || ||||| ||
Sbjct 350053 GAAGTCGATTCCTTCATAGAGCGAATCAATCTCAATACTGGCCTGGGTACTGGAAGAAAG 350112
Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC-GTAAG-GCTTTTG--CTGATT 282131
| ||| |||||||||||||| || || | || | || | || |||||| || | |
Sbjct 350113 GGTACGCTTAGCACGTTCACAAGCAGTGCGGAGACGTCTGACAGCCCTTTTGTTCTCACT 350172
Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189
||| || | |||| || | ||| || ||| ||| | | ||| | || | ||
Sbjct 350173 GAT----GTCCTTCTTATGCTTGCGCTTAAACTCTGCAATAAA--ATGGTTGACCATTCG 350226
Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249
|| ||||| ||||| || || || | || | || | |||| | | |||| |||||
Sbjct 350227 GTTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTCACTTCGAAAAT 350286
Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309
||||||||||| | | || | |||||| || ||||| |||| ||||| || ||
Sbjct 350287 TCCATCTTCAATTGTGAGAATCGACACATCAAAAGTGCCACCTCCCAAGTCAAAGATCAG 350346
Query 282310 TACATTCATTTC 282321
||||| ||||
Sbjct 350347 CACATTTCTTTC 350358
>seq2203
Length=850018
Score = 116 bits (128), Expect = 3e-20
Identities = 352/534 (66%), Gaps = 11/534 (2%)
Strand=Plus/Plus
Query 282347 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 282406
|| |||| ||||||||||||||| ||||| |||||||| | ||||| |||||||||||
Sbjct 409903 TAAGCAATAGCAGCAGCAGTTGGCTCATTGATAATTCTAAGTACATTGAGACCAGCAATA 409962
Query 282407 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 282466
|||| |||||||| ||||| || | || || || || || || ||||| || || ||
Sbjct 409963 ATTCCAGCATCTTTGGTGGCCTGCCACTGAGAGTCATTGAAGTAAGCAGGTACTGTTATG 410022
Query 282467 ACGGCATCTGTTACTTCTTTTCC-AATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAA 282525
|| |||| || || | | |||| || || || ||| ||| ||| | || | ||
Sbjct 410023 ACAGCATTTG-TAATGGTCTTCCAAAGGTAGGCTTCTGCAATTTCCTTCGTCTTTGTCAA 410081
Query 282526 AATCATTGATGAAATTTGTTCTGGA---GAATATTGCTTGGATTCATTTTGATATGATAC 282582
|| ||| ||||| | | |||||| ||| || ||| | |||| ||| |||
Sbjct 410082 AACCATAGATGACACCTCCTCTGGATAGGAACTTT--TTGTCTCTCCTTTG-TATTCTAC 410138
Query 282583 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642
|| | || || | || ||| | || | || || | || |||||||| ||
Sbjct 410139 TT-GGCCTTGGGCTTGCCAGCATTATTCACCACCATGAAGGGGCGATGGTTCATATCAGA 410197
Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATT-AATCGTTTTGCATCAAAAATAGTAT 282701
||| ||| ||| | |||||| | | ||| | |||| ||||||||| | |
Sbjct 410198 TTGGACAACAGTATCA-TCAAATCTATGTCTATTCAGGTGTTTGGCATCAAAAGCCATGT 410256
Query 282702 TGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG 282761
|||| || | | ||| |||| | || || ||||| || |||| || || | || |
Sbjct 410257 TGGTGGGGGTCATTGCCACTTGTTTCTTTGCAGCATCACCTATCAATTGCTCCATATCAG 410316
Query 282762 TAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTT 282821
|||| | || || |||| | || | || | | || || ||||| ||||| ||||
Sbjct 410317 TAAAGTACACCTAACTTGGAATGGTTTGGTTTTCCTAATTGTTGGCAATTATTTCCACTT 410376
Query 282822 TACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 282875
| | || | ||||| |||||| |||| || || | |||||| ||||
Sbjct 410377 CTCTACGCTGGAAGACACCCACACAAGAGTAAGTGGTGCCGAGATCAATGCCAA 410430
>seq558
Length=2832783
Score = 107 bits (118), Expect = 1e-17
Identities = 207/300 (69%), Gaps = 18/300 (6%)
Strand=Plus/Minus
Query 281257 AGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCT 281314
|| |||| |||||||||||||| ||| ||||| || ||| || ||| |||||| |
Sbjct 937524 AGCATAACTTTCTAATTCATTTCTAGTATCAAT-GC-GCTCCTTGAGCTTTTTATCTTCC 937467
Query 281315 TCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGAGAATCT 281370
|| |||| | || ||| || ||| ||| || || || | || |||| || |
Sbjct 937466 TCAGCAAACTTTTCAGCATCATTAACCATCCTTTCGATCTCTTCAGGTGTCAGGCGATTT 937407
Query 281371 TCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGC 281427
| ||| ||| ||||| || || || || |||||| ||| ||| || | ||
Sbjct 937406 T----GATCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGC 937354
Query 281428 AGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCC 281487
||||| |||||| ||||| |||| | ||||| ||||||||||| || ||||| ||
Sbjct 937353 TGTCACTCGAAGAATGCCATTCACATCTATCTCAAAAGTGACTTCAATCTGTGGGACTCC 937294
Query 281488 TCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 281547
| ||||||| ||||| || || || ||| ||||||||| || ||| ||||| ||
Sbjct 937293 ACGGGGAGCAGGAGGGATTCCAGTCAGATCAAAAGTTCCCAGAAGATGATTGTCTTTTGT 937234
>seq1991
Length=4069235
Score = 102 bits (112), Expect = 6e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356
||||| || || |||| |||||||| ||||||||||| || ||| | || |||||| |
Sbjct 1615253 TGTACACTTATCCTGACCGAGGGAGACTCAGCTAAAACTTTGGCTGTTTCAGGCCTTGGT 1615312
Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416
|| |||| |||||| ||||| |||||||| |||||||||||| | | |||||| |
Sbjct 1615313 GTGGTTGGGAGAGATAGATATGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 1615372
Query 400417 GATGCT 400422
|| |||
Sbjct 1615373 GAAGCT 1615378
>seq435
Length=2947834
Score = 86.0 bits (94), Expect = 5e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235
||| ||||| || ||||| ||||| ||||| ||||||||| | || || | || ||
Sbjct 1511763 TGTCGTAGCTACCATAGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTCAT 1511822
Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295
|||||| || ||||| ||| | || || ||||| || || ||||||||||| || ||
Sbjct 1511823 TCATTATGGTGCTCCTAAGGAAATGGAGTCATATTACCAGGAGATTGGTAGAGCTGGCCG 1511882
Query 131296 TGATGGA 131302
||||||
Sbjct 1511883 CGATGGA 1511889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740508151522740
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