Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq2271 104 2e-17 >seq2271 Length=763556 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||| || ||| | ||| |||| || |||| |||| ||| Sbjct 620844 TCCAGCATATGGGGACCGACCTGTGACGGCCTCGATCGCATCGTCGAGCGCTGTGGCCTG 620903 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || || ||||||||| | | |||||||||||||||||||||| | ||| | Sbjct 620904 CCCGAGATGCACGTCGGCGACTGGATGCTCTTTGAAAACATGGGCGCTTACACCGTGGCC 620963 Query 21242 AGCTCTTCAACCTTTAACGGCTTCC 21266 | | || ||||| ||||| |||| Sbjct 620964 GCCGCGTCCACCTTCAACGGGTTCC 620988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463531172143200