Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq1770 89.7 5e-13 >seq1770 Length=1768684 Score = 89.7 bits (98), Expect = 5e-13 Identities = 89/113 (79%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 167 CACACACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTT 226 ||||||||| || | |||||| |||| ||||||| ||| ||||||||||||||| | Sbjct 902898 CACACACAAAATCCGAAACAGATTATGAGAAAAACTCAAAATAATTTATTAAATAGGTAC 902839 Query 227 CAAGGGCTTCTTTAAGAAGCATTAACAATCTAACAACATTTTATAAATAACAA 279 |||||||| || ||| ||||||||||| || ||| || ||||||| ||| Sbjct 902838 CAAGGGCTCCTCCAAGGAGCATTAACAA-CTCTCAA-ATACAATAAATATCAA 902788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438546349820000