Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 176 9e-39
seq2363 141 2e-28
seq1767 129 1e-24
seq171 116 7e-21
seq2069 104 5e-17
seq1689 104 5e-17
seq2080 100 6e-16
seq1958 100 6e-16
seq1 87.8 4e-12
seq2435 84.2 4e-11
seq1704 84.2 4e-11
>seq1424
Length=2309046
Score = 176 bits (194), Expect = 9e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||||| |||||| || | ||||| || || || ||||| || || |||||||
Sbjct 23438 TACCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAG 23497
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || ||||| || || || || |||||||| || || || || |||||||
Sbjct 23498 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAG 23557
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || |||||||| || || || ||| | ||||| |
Sbjct 23558 GGATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCA 23617
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||| || || |||||||| |||| ||||| || || || ||||||
Sbjct 23618 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 23667
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||| || || | ||||| || || |||||||| || || ||||||||
Sbjct 22756 CCACCCCTCAGACGTAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 22815
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || || || || ||||| || |||||||| || || || || ||||||||
Sbjct 22816 AGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 22875
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| || ||||| || || ||||| ||||| || ||| | ||||| |||
Sbjct 22876 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACT 22935
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 22936 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 170 bits (188), Expect = 4e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| |||||| || | ||||| || || |||||||| || || || ||||
Sbjct 22982 TACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAG 23041
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || || || || ||||| || |||||||| || || || || || ||||
Sbjct 23042 AAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAG 23101
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || ||||| ||||| || ||| | ||||| |
Sbjct 23102 GAATACCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCA 23161
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 23162 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| |||||| || | ||||| || || || ||||| || || |||||||
Sbjct 23210 TACCGCCCCTCAGACGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAG 23269
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || || || || ||||| || |||||||| || || || || ||||| |
Sbjct 23270 AAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGG 23329
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || ||||| ||||| || ||| | || || |
Sbjct 23330 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCA 23389
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| |||| ||||| || || ||||||||
Sbjct 23390 CCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23438
>seq2363
Length=646923
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
|||||||||||| || || || | |||||| || || || ||||| || || || || ||
Sbjct 187906 ACCTCCTCTCAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 187847
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | |||||||| || || ||||| |||||||| || || || || || || ||
Sbjct 187846 CAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 187787
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| || || || || || || || || | || || ||
Sbjct 187786 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCAC 187727
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || ||||| || |||| ||||| || || ||||||||
Sbjct 187726 CTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
>seq1767
Length=1785757
Score = 129 bits (142), Expect = 1e-24
Identities = 151/203 (74%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| || || || || || || ||||| | | | || ||||| | ||||
Sbjct 523813 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACATCCATCTTCCAATTGT 523872
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||||| |||||| | ||||| ||||| |||||||||||||| || |||||
Sbjct 523873 TTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTG 523932
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||| | ||||| || || | ||| | ||||| |||||
Sbjct 523933 GCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGAGTGAAGGTCTTCCCTGTT 523992
Query 82788 AA-CGTCTTTACAAATATCTGCA 82809
|| || || || || |||| ||
Sbjct 523993 AAGGGTTTTCACGAAAATCTCCA 524015
>seq171
Length=354554
Score = 116 bits (128), Expect = 7e-21
Identities = 124/160 (78%), Gaps = 3/160 (2%)
Strand=Plus/Minus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| ||||| ||||| || ||||||||| | |||||||| ||||| ||||| ||| |||||
Sbjct 310954 CCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTTCTTCC 310895
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCG-TATCATTAG-GTTCTACTTCCAAAG 82770
|||| ||||| || || ||||||||||| |||| |||| | || |||| || || | ||
Sbjct 310894 TTATTCTGAATTTTGGCCTTTACATTTTCTATCGTTATC-TGAGTGTTCAACCTCGAGAG 310836
Query 82771 TTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || | | || |||| || ||||||||
Sbjct 310835 TGATGGTCTTCCCCATAAGAGTTTTTATGAAAATCTGCAT 310796
>seq2069
Length=3899032
Score = 104 bits (114), Expect = 5e-17
Identities = 147/206 (71%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 82605 AAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGT 82664
||| | |||||||| ||||| | || | || |||| | | | || ||||| |||
Sbjct 1248463 AAGAGAAGAGTAGACTCTTTTT---TAATGTAGCCAGACAAAGTATGTCCATCTTCCAGT 1248519
Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724
|| || || |||||| | |||||||| ||||| ||||| |||||||||||| | | |||
Sbjct 1248520 TGCTTGCCGGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTACCCTAGATC 1248579
Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784
|| || ||||||||| | | || || ||||||||| || | || || ||||| ||
Sbjct 1248580 TTGGCCTTTACATTTGCTTTTGTGTCCAAAGGTTCTACCTCAAGAGCGATGGTCTTCCCC 1248639
Query 82785 GTCAACGTCTTTACAAATATCTGCAT 82810
| || || ||||| |||| |||
Sbjct 1248640 ATATGGGTTTTCACAAAAATCTTCAT 1248665
>seq1689
Length=2064527
Score = 104 bits (114), Expect = 5e-17
Identities = 145/202 (72%), Gaps = 1/202 (0%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || | |||||||| | | || ||||| |||||
Sbjct 174769 TGAAGAGTGGACTCCTTTTGAATGCTGTAATCAGACAAGGTATGTCCATCTTCCAGTTGC 174828
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| |||||||| |||| ||||| ||||||||||||| || |||||
Sbjct 174829 TTGCCAGCAAAGATCAGTCTTTGCTGATGAGGAGGAATTCCTTCCTTATTCTGGATCTTG 174888
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCC-TGT 82786
|| |||| || | | || ||||| | ||| || || | ||| || ||||| || |||
Sbjct 174889 GCCTTTATATCTCCTATTGTATCCAAGGCTTCAACCTCGAGAGTAATGGTCTTCCCTTGT 174948
Query 82787 CAACGTCTTTACAAATATCTGC 82808
| || || | || ||||||
Sbjct 174949 AAGGGTTTTCAAGAAAATCTGC 174970
>seq2080
Length=3818131
Score = 100 bits (110), Expect = 6e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| ||||| || || || || || | || ||||||||| | || ||||| |||||
Sbjct 1111775 TGAAGAGTGGACTCCTTTTGAATGTCGTAGTCAGATAGAGTATGTCCATCTTCCAGTTGC 1111716
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| || ||||| ||||| ||||| |||||||| ||||| || |||||
Sbjct 1111715 TTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGGATCTTG 1111656
Query 82728 GCTTTTACATTTT 82740
|| |||| || ||
Sbjct 1111655 GCCTTTATATATT 1111643
>seq1958
Length=4156293
Score = 100 bits (110), Expect = 6e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
||| |||| || ||||||||||| |||||||| |||| |||| ||||||||||||||
Sbjct 633083 TTCCAGTTACTTGCCAGCAAAGATCAGTCTTTGCCGATCAAGAGGAATTCCTTCCTTATC 633024
Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777
|| | ||| || | ||||||||| || ||||| ||||| | | | ||| || ||
Sbjct 633023 CTGGAACTTGGCCTCTACATTTTCTATTGTATCCGAGGGTTCAGCCTAGAGAGTGATGGT 632964
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | || || || || ||||||||
Sbjct 632963 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 632931
>seq1
Length=8996366
Score = 87.8 bits (96), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||| | || || || || | || ||||| | | | || ||||| | |||
Sbjct 4848814 TGAAGAGTAAACTCCTTTTGAATGTGGTAGTCAGACAAGGTACACCCATCTTCCAATTGC 4848755
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| | | ||| || || | ||| ||||||||||| || || |||||
Sbjct 4848754 TTGCCAGCAAAGATCAATACTTGCTGGTCAGAAGGAATTCCTTCCTTTTCCTGGATCTTG 4848695
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| ||||||||||| || ||| | || ||| | || | | | | ||||| || ||
Sbjct 4848694 GCCTTTACATTTTCTATTGTAACCAAAGCTTCAATCTCGAGAATGACGGTCTTTCCGGTA 4848635
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| || || | || ||||||||
Sbjct 4848634 AGAGTTTTCAAGAAAATCTGCAT 4848612
>seq2435
Length=3389772
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|| ||||| ||||| || || ||||| || |||||||| || ||| | || || || ||
Sbjct 1634048 CCCTCCTTGTCTTGGATTTTAGCTTTGACGTTTTCAATGGTGTCACTGGGCTCGACCTCG 1634107
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || ||||||||||||| ||||| ||||| ||||||||
Sbjct 1634108 AGTGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1634151
>seq1704
Length=2019467
Score = 84.2 bits (92), Expect = 4e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 59870 GATAAACGTGTAGACAATTGGCTGTTAATGAATTCACCTATTCCTACAATATGTATAAGT 59929
|||||||||||||| ||||||| | ||| | || || | |||||| | |||||||||
Sbjct 1830416 GATAAACGTGTAGAAAATTGGCCTCTGATGCAGTCCCCCCTGCCTACACTTTGTATAAGT 1830475
Query 59930 ACTTTGTATCTAATTATTGTCTGGTTAGGACCTAAATGGATGAAAACTAGAAACGCGTTT 59989
||| | ||||| | |||| ||| | || || ||||||||||| | || | || |||
Sbjct 1830476 ACTCTTTATCTCCTGTTTGTGTGGCTGGGTCCAAAATGGATGAAGGCCCGAGAAGCTTTT 1830535
Query 59990 AATATCAGATGGTTGTTGGTCTTATATAATTTTTCTATGGTATTTCTAAACTTTTATAT 60048
| || | | || | | | ||||||||| ||||| || || ||| ||| |||
Sbjct 1830536 CAGATGCGCTTAGTGCTCATTCTCTATAATTTTGGGATGGTTTTGCTTAACCTTTTTAT 1830594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981795876644110
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