Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq1787 113 6e-20
seq1874 107 3e-18
seq1849 105 9e-18
seq2363 104 3e-17
seq2358 104 3e-17
seq303 104 3e-17
seq12 104 3e-17
>seq1787
Length=1733653
Score = 113 bits (124), Expect = 6e-20
Identities = 73/80 (91%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712
|||||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 1263624 CTTATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 1263683
Query 8713 GATTCCCCGACGAGGAGCAG 8732
|||||||||||| |||| ||
Sbjct 1263684 GATTCCCCGACGGGGAGAAG 1263703
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1263629 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1263688
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 1263689 CCCGACGGGGAG 1263700
Score = 96.9 bits (106), Expect = 5e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 139344 GGCCCACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATAT 139403
||| ||| |||| ||||||||| |||||||||||||||||| | |||| ||||||||
Sbjct 1263709 GGCACACTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1263650
Query 139404 TAACCACTATACTAACGAGGA 139424
| |||||||||||||||||||
Sbjct 1263649 TCACCACTATACTAACGAGGA 1263629
>seq1874
Length=1505261
Score = 107 bits (118), Expect = 3e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 162516 ATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 162575
Query 8716 TCCCCGACGAGGAG 8729
||||||||| ||||
Sbjct 162576 TCCCCGACGGGGAG 162589
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 162518 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 162577
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 162578 CCCGACGGGGAGG 162590
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 162589 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 162530
Query 139413 TACTAACGAGGATTT 139427
|||||||||||| ||
Sbjct 162529 TACTAACGAGGAATT 162515
>seq1849
Length=1567762
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||
Sbjct 399418 TTCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 399477
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 399478 CCCCGACGGGGAG 399490
Score = 96.9 bits (106), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 399419 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 399478
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 399479 CCCGACGGGGAGG 399491
Score = 95.1 bits (104), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 139349 ACAAC-TCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAAC 139407
||||| ||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||
Sbjct 399495 ACAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAAC 399436
Query 139408 CACTATACTAACGAGGA 139424
|||||||||||||||||
Sbjct 399435 CACTATACTAACGAGGA 399419
>seq2363
Length=646923
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 175270 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 175329
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 175330 CCCCGACGGGGAGG 175343
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 175271 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 175330
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 175331 CCCGACGGGGAG 175342
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 175342 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 175283
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 175282 TACTAACGAGGA 175271
>seq2358
Length=653997
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 120511 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 120570
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 120571 CCCCGACGGGGAGG 120584
Score = 104 bits (114), Expect = 3e-17
Identities = 71/79 (90%), Gaps = 2/79 (3%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 120512 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 120571
Query 8718 CCCGACGAGGAG--CAGAG 8734
||||||| |||| |||||
Sbjct 120572 CCCGACGGGGAGGCCAGAG 120590
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 138275 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 138334
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 138335 CCCGACGGGGAG 138346
Score = 100 bits (110), Expect = 4e-16
Identities = 68/75 (91%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 138272 CACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 138331
Query 11786 TTCCCCGACGAGGAG 11800
|||||||||| ||||
Sbjct 138332 TTCCCCGACGGGGAG 138346
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 120583 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 120524
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 120523 TACTAACGAGGA 120512
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 138346 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 138287
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 138286 TACTAACGAGGA 138275
>seq303
Length=249116
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 238364 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 238423
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 238424 CCCCGACGGGGAGG 238437
Score = 104 bits (114), Expect = 3e-17
Identities = 71/79 (90%), Gaps = 2/79 (3%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 238365 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 238424
Query 8718 CCCGACGAGGAG--CAGAG 8734
||||||| |||| |||||
Sbjct 238425 CCCGACGGGGAGGCCAGAG 238443
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 243019 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 243078
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 243079 CCCCGACGGGGAGG 243092
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 243020 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 243079
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 243080 CCCGACGGGGAG 243091
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 238436 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 238377
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 238376 TACTAACGAGGA 238365
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 243091 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 243032
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 243031 TACTAACGAGGA 243020
>seq12
Length=508329
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 143862 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 143803
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 143802 CCCGACGGGGAG 143791
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 143862 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 143803
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 143802 CCCGACGGGGAGG 143790
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 143791 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 143850
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 143851 TACTAACGAGGA 143862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652824480205600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |