Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 147 2e-30
seq2363 145 7e-30
seq2309 95.1 1e-14
seq2201 91.5 1e-13
seq557 89.7 5e-13
seq54 87.8 2e-12
seq2256 84.2 2e-11
seq2050 82.4 7e-11
>seq1424
Length=2309046
Score = 147 bits (162), Expect = 2e-30
Identities = 157/205 (77%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||||||||| || |||||||| | ||| | | | ||||| ||||
Sbjct 22779 ATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCCTCCAGCT 22837
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | || |||| ||||||||| ||||||||||||||||| || |||||
Sbjct 22838 GTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCT 22897
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| ||||| |||| ||||| || | ||||| ||| |||||||
Sbjct 22898 TGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 22957
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||||||||||||
Sbjct 22958 TCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 138 bits (152), Expect = 1e-27
Identities = 155/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || |||||||| | ||| | | | ||||| ||||
Sbjct 23235 ATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCCTCCAGCT 23293
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | ||||||| ||||||||| || |||||||||||||| || |||||
Sbjct 23294 GTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCT 23353
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| ||||| | |||||||| || | ||||| ||| |||||||
Sbjct 23354 TGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCTAGGGTGATGGTCTTGCCGG 23413
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 23414 TCAGGGTCTTCACGAAGATCTGCAT 23438
Score = 132 bits (146), Expect = 5e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||||||||| || ||||| || | ||| | | | ||||| ||||
Sbjct 23007 ATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA-TCCTCCAGCT 23065
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | ||||||| ||||||||| ||||| || |||||||| || |||||
Sbjct 23066 GTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCT 23125
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| ||||| |||| ||||| || | ||||| ||| |||||||
Sbjct 23126 TGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 23185
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 23186 TCAGGGTCTTCACGAAGATCTGCAT 23210
Score = 132 bits (146), Expect = 5e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || |||||||| | ||| | | | || || ||||
Sbjct 23463 ATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCT 23521
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | ||||||| ||||||||| ||||||||||||||||| || |||||
Sbjct 23522 GCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCT 23581
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||| | ||||| |||| ||||| || | ||||| ||| |||||||
Sbjct 23582 TGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 23641
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| || |||||
Sbjct 23642 TCAGGGTCTTCACGAAGATTTGCAT 23666
>seq2363
Length=646923
Score = 145 bits (160), Expect = 7e-30
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| ||| || |||||||| ||
Sbjct 187876 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCC 187817
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| ||||||||| || ||||||||||||||||| |||||| |||
Sbjct 187816 GGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 187757
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | |||||| |||||||||| || | ||||| ||| || |||||||| ||
Sbjct 187756 GACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGT 187697
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 187696 CTTCACGAAGATCTGCAT 187679
>seq2309
Length=718661
Score = 95.1 bits (104), Expect = 1e-14
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 133461 ATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTG 133520
||||||||||||||||| |||| || || | ||| | ||||| ||||| |||
Sbjct 498295 ATGGTGGACTCTTTCTGGATATCATAGTCTGAGAAAGTGCAGCCATCCTCCAGCTGTTTG 498354
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
| || |||| || | ||||||| | || |||||||| |||||||| ||| ||| ||
Sbjct 498355 CAGGCAAAAATCAGACACTGCTGGCCAGGTGGGATGCCCTCCTTGTCTCGGAT-TTTAGC 498413
Query 133581 -TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639
|||| | ||| ||||| || ||| || |||| |||| ||| ||||| |||
Sbjct 498414 TTTGATGTTATCAGTGGTGTCACTGAACTCGACCTCGAGTGTGATGGTCTTGCCCATCAC 498473
Query 133640 AGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 498474 GGTCTTCACGAAGATCTGCAT 498494
>seq2201
Length=851120
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||||||||| | ||||| | | || ||| | || || |||||||| |
Sbjct 771264 GTAGACTCTTTCTGCCTGTTGTAGTTGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCTG 771205
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || ||| ||| | || || | ||||||||| ||||| |||||| ||||
Sbjct 771204 GCGAAGATCGGCCTCTGTTCATCAGGGGAGATGCCTTCTTTGTCTTGGATCTTGGCCTTG 771145
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | | | | |||||| |||||||||| || | || || ||| || |||||| ||
Sbjct 771144 ACGTTCCCGATGGTGTCGCTGGGCTCCACCTCCAGGGCGATGGTCTTCTCGGTCAAGGTC 771085
Query 133644 TTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 771084 TTCACGAAGATCTGCATG 771067
>seq557
Length=6002282
Score = 89.7 bits (98), Expect = 5e-13
Identities = 110/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| |||||||| |||| || ||||||| | | || | ||||||||||||||| |||
Sbjct 132925 TGTTTGCCCGCAAAAATCAGACGCTGCTAGGCAGGTGAGATGCCTTCCTTGTCTTGGATT 132866
Query 133575 TTTTGC-TTGAGCTGCTCAA-CCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | |||| |||| |||||| || |||| |||| ||| ||||
Sbjct 132865 TTTAGCTTTGACATTTTCAAGGATTGTCACTGGGCTTAACTTCGAGTGTGATGGTCTTGC 132806
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || ||||| ||||||||
Sbjct 132805 CAGTCAGGGTCTTCACGAAGATCTGCAT 132778
>seq54
Length=460634
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/199 (71%), Gaps = 3/199 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||| || ||||| || || | ||| | | ||| ||||| |||||
Sbjct 180516 GGTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCAGCTGTTTGCC 180457
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
| | | || || ||||||||||| || || ||||| |||||||| ||| ||| || |
Sbjct 180456 CACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGAT-TTTAGCTT 180398
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | |||| || | || |||| ||| ||||| ||||| |
Sbjct 180397 TGACATTTTCGATGGTGTCACT-GGCTGGACCTTGAGTGTGATGGTCTTGCCCGTCAGGG 180339
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 180338 TCTTCACAAAGATCTGCAT 180320
>seq2256
Length=771247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/160 (73%), Gaps = 8/160 (5%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || ||| | |||||||| |||| || ||||||||||| || |||||||| ||||||
Sbjct 650781 TCTTCCAGCCGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 650722
Query 133566 TCGGTGATCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
|| ||| ||| || |||| | ||| ||||| ||||||| || ||| ||||
Sbjct 650721 TCTTGGAT-TTTAGCTTTGATGTTTTCAGTGGTGTCACTGGGCTCGACCTCG--TGTGAT 650665
Query 133625 GGTTTTGCC----GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||| | |||||| || || || || ||||||||
Sbjct 650664 GGTCTTGTCCCAAGGTCAGGGTCTTCACAAAGATCTGCAT 650625
>seq2050
Length=1126483
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
|| || | ||| |||||||||| ||||||| || | ||| | |||||| |||
Sbjct 569146 AAGTGCAGGGTAAACTCTTTCTGGGTATTGTAGTCCGAGAGAGTGCAGTTGTCCTCCAGC 569087
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| ||||| || |||| || | ||||||||| | ||||||||||||||||| |||
Sbjct 569086 TGTTTGCCTGCAAAAATCAGACACTGCTGGTCATGTGGGATGCCTTCCTTGTCTCGGAT- 569028
Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| || |||| | ||| |||| ||||||| || || || | || |||||
Sbjct 569027 TTTAGCTTTGACGTTATCAGTGGTGTTATTGGGCTCGACCTCATGTGTAATAGTCTTGCC 568968
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||| ||||||||
Sbjct 568967 CATCAGTGTCTTCGTGAAGATCTGCAT 568941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483405753527600
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