Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1424 147 2e-30 seq2363 145 7e-30 seq2309 95.1 1e-14 seq2201 91.5 1e-13 seq557 89.7 5e-13 seq54 87.8 2e-12 seq2256 84.2 2e-11 seq2050 82.4 7e-11 >seq1424 Length=2309046 Score = 147 bits (162), Expect = 2e-30 Identities = 157/205 (77%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || |||||||| | ||| | | | ||||| |||| Sbjct 22779 ATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCCTCCAGCT 22837 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | || |||| ||||||||| ||||||||||||||||| || ||||| Sbjct 22838 GTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCT 22897 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| |||| ||||| || | ||||| ||| ||||||| Sbjct 22898 TGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 22957 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || |||||||||||||| Sbjct 22958 TCAGGGTCTTCACGAAAATCTGCAT 22982 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || |||||||| | ||| | | | ||||| |||| Sbjct 23235 ATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCCTCCAGCT 23293 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | ||||||| ||||||||| || |||||||||||||| || ||||| Sbjct 23294 GTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCT 23353 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| | |||||||| || | ||||| ||| ||||||| Sbjct 23354 TGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCTAGGGTGATGGTCTTGCCGG 23413 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 23414 TCAGGGTCTTCACGAAGATCTGCAT 23438 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || ||||| || | ||| | | | ||||| |||| Sbjct 23007 ATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA-TCCTCCAGCT 23065 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| || | ||||||| ||||||||| ||||| || |||||||| || ||||| Sbjct 23066 GTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCT 23125 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| |||| ||||| || | ||||| ||| ||||||| Sbjct 23126 TGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 23185 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 23186 TCAGGGTCTTCACGAAGATCTGCAT 23210 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || |||||||| | ||| | | | || || |||| Sbjct 23463 ATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCT 23521 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | ||||||| ||||||||| ||||||||||||||||| || ||||| Sbjct 23522 GCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCT 23581 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | ||||| |||| ||||| || | ||||| ||| ||||||| Sbjct 23582 TGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGG 23641 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| || ||||| Sbjct 23642 TCAGGGTCTTCACGAAGATTTGCAT 23666 >seq2363 Length=646923 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| || ||| ||| || |||||||| || Sbjct 187876 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCC 187817 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || ||||||||||||||||| |||||| ||| Sbjct 187816 GGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 187757 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| |||||||||| || | ||||| ||| || |||||||| || Sbjct 187756 GACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGT 187697 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 187696 CTTCACGAAGATCTGCAT 187679 >seq2309 Length=718661 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 133461 ATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTG 133520 ||||||||||||||||| |||| || || | ||| | ||||| ||||| ||| Sbjct 498295 ATGGTGGACTCTTTCTGGATATCATAGTCTGAGAAAGTGCAGCCATCCTCCAGCTGTTTG 498354 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 | || |||| || | ||||||| | || |||||||| |||||||| ||| ||| || Sbjct 498355 CAGGCAAAAATCAGACACTGCTGGCCAGGTGGGATGCCCTCCTTGTCTCGGAT-TTTAGC 498413 Query 133581 -TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 |||| | ||| ||||| || ||| || |||| |||| ||| ||||| ||| Sbjct 498414 TTTGATGTTATCAGTGGTGTCACTGAACTCGACCTCGAGTGTGATGGTCTTGCCCATCAC 498473 Query 133640 AGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 498474 GGTCTTCACGAAGATCTGCAT 498494 >seq2201 Length=851120 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| | ||||| | | || ||| | || || |||||||| | Sbjct 771264 GTAGACTCTTTCTGCCTGTTGTAGTTGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCTG 771205 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || ||| ||| | || || | ||||||||| ||||| |||||| |||| Sbjct 771204 GCGAAGATCGGCCTCTGTTCATCAGGGGAGATGCCTTCTTTGTCTTGGATCTTGGCCTTG 771145 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | | | | |||||| |||||||||| || | || || ||| || |||||| || Sbjct 771144 ACGTTCCCGATGGTGTCGCTGGGCTCCACCTCCAGGGCGATGGTCTTCTCGGTCAAGGTC 771085 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 771084 TTCACGAAGATCTGCATG 771067 >seq557 Length=6002282 Score = 89.7 bits (98), Expect = 5e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || |||||||| |||| || ||||||| | | || | ||||||||||||||| ||| Sbjct 132925 TGTTTGCCCGCAAAAATCAGACGCTGCTAGGCAGGTGAGATGCCTTCCTTGTCTTGGATT 132866 Query 133575 TTTTGC-TTGAGCTGCTCAA-CCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | |||| |||| |||||| || |||| |||| ||| |||| Sbjct 132865 TTTAGCTTTGACATTTTCAAGGATTGTCACTGGGCTTAACTTCGAGTGTGATGGTCTTGC 132806 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || ||||| |||||||| Sbjct 132805 CAGTCAGGGTCTTCACGAAGATCTGCAT 132778 >seq54 Length=460634 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||| || ||||| || || | ||| | | ||| ||||| ||||| Sbjct 180516 GGTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCAGCTGTTTGCC 180457 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 | | | || || ||||||||||| || || ||||| |||||||| ||| ||| || | Sbjct 180456 CACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGAT-TTTAGCTT 180398 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | |||| || | || |||| ||| ||||| ||||| | Sbjct 180397 TGACATTTTCGATGGTGTCACT-GGCTGGACCTTGAGTGTGATGGTCTTGCCCGTCAGGG 180339 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 180338 TCTTCACAAAGATCTGCAT 180320 >seq2256 Length=771247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/160 (73%), Gaps = 8/160 (5%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||| | |||||||| |||| || ||||||||||| || |||||||| |||||| Sbjct 650781 TCTTCCAGCCGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 650722 Query 133566 TCGGTGATCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || ||| ||| || |||| | ||| ||||| ||||||| || ||| |||| Sbjct 650721 TCTTGGAT-TTTAGCTTTGATGTTTTCAGTGGTGTCACTGGGCTCGACCTCG--TGTGAT 650665 Query 133625 GGTTTTGCC----GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| | |||||| || || || || |||||||| Sbjct 650664 GGTCTTGTCCCAAGGTCAGGGTCTTCACAAAGATCTGCAT 650625 >seq2050 Length=1126483 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| |||||||||| ||||||| || | ||| | |||||| ||| Sbjct 569146 AAGTGCAGGGTAAACTCTTTCTGGGTATTGTAGTCCGAGAGAGTGCAGTTGTCCTCCAGC 569087 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || |||| || | ||||||||| | ||||||||||||||||| ||| Sbjct 569086 TGTTTGCCTGCAAAAATCAGACACTGCTGGTCATGTGGGATGCCTTCCTTGTCTCGGAT- 569028 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | ||| |||| ||||||| || || || | || ||||| Sbjct 569027 TTTAGCTTTGACGTTATCAGTGGTGTTATTGGGCTCGACCTCATGTGTAATAGTCTTGCC 568968 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||| |||||||| Sbjct 568967 CATCAGTGTCTTCGTGAAGATCTGCAT 568941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405753527600