Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1767 109 1e-18
seq1 98.7 2e-15
seq2080 93.3 1e-13
seq1689 91.5 3e-13
seq2363 89.7 1e-12
seq1424 89.7 1e-12
seq2201 87.8 4e-12
seq2069 84.2 5e-11
>seq1767
Length=1785757
Score = 109 bits (120), Expect = 1e-18
Identities = 148/205 (72%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCA-CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||||| || | |||| || || ||||| | || || ||| || | ||| | |||
Sbjct 524001 AAAACCCTTAACAGGGAAGACCTTCACTCTTGAGGTTGAACCCTCGGTTACAATAGAAAA 523942
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|||||| ||||| || || || ||||||||| || || | |||||| |||||
Sbjct 523941 TGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCGAAGACTGATCTT 523882
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| | || || |||||||||||| | || ||| | || |||||| | || || |||||
Sbjct 523881 TGCTGACAAACAATTGGAAGATGGATGTACCTTGTCTGACTACAACATTCAAAAGGAGTC 523822
Query 206364 TACTCTTCACCTTGTTTTGAGACTT 206388
||||||||| ||||| |||||||||
Sbjct 523821 TACTCTTCATCTTGTGTTGAGACTT 523797
>seq1
Length=8996366
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || | ||||| || || ||||| || ||| | | || | ||| || |
Sbjct 4848615 CAGATTTTCTTGAAAACTCTTACCGGAAAGACCGTCATTCTCGAGATTGAAGCTTTGGTT 4848674
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | ||| |||||| ||||| || ||||| ||||||||| | ||| |||
Sbjct 4848675 ACAATAGAAAATGTAAAGGCCAAGATCCAGGAAAAGGAAGGAATTCCTTCTGACCAGCAA 4848734
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| | ||||| || || ||||| ||||||||||| | || ||| | || ||| || |
Sbjct 4848735 GTATTGATCTTTGCTGGCAAGCAATTGGAAGATGGGTGTACCTTGTCTGACTACCACATT 4848794
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389
|| || |||| ||||||||| |||| ||||||||||
Sbjct 4848795 CAAAAGGAGTTTACTCTTCATCTTGCGTTGAGACTTC 4848831
>seq2080
Length=3818131
Score = 93.3 bits (102), Expect = 1e-13
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305
||||| ||||| || || |||||||||||| || || ||||| || ||||| |
Sbjct 1111649 TAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCAGCAAAGGCTGATCTTTG 1111708
Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365
| || ||||| ||||||||||| ||| | | || ||| || | || || ||||| |
Sbjct 1111709 CTGGCAAGCAACTGGAAGATGGACATACTCTATCTGACTACGACATTCAAAAGGAGTCCA 1111768
Query 206366 CTCTTCACCTTGTTTTGAGACTTC 206389
||||||| ||||| ||||||||||
Sbjct 1111769 CTCTTCATCTTGTGTTGAGACTTC 1111792
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
|||||||||| ||||| |||||||| ||||| || || | | ||||||| | |||
Sbjct 1111792 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTCGTAGTCAGATAGAGTAT 1111733
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || || ||||| |||| ||| |||
Sbjct 1111732 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGA 1111689
>seq1689
Length=2064527
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/217 (70%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACA-GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231
||||| || | ||||| || ||| || || || || ||| | || || ||| | ||
Sbjct 174969 CAGATTTTCTTGAAAACCCTTACAAGGGAAGACCATTACTCTCGAGGTTGAAGCCTTGGA 174910
Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | | | ||||| ||||| || | || ||||||||| || | ||
Sbjct 174909 TACAATAGGAGATATAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTCATCAGCA 174850
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||||| ||||| || || ||||| ||||||||||| || ||| | ||||||| | |
Sbjct 174849 AAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACCTTGTCTGATTACAGCAT 174790
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388
|| || ||||| |||||||| || || |||||||||
Sbjct 174789 TCAAAAGGAGTCCACTCTTCATCTCGTGTTGAGACTT 174753
>seq2363
Length=646923
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| ||||| ||||
Sbjct 187694 AAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGCGACACCATCGAGAAC 187753
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| || || ||| || || || |||||
Sbjct 187754 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGGCTGATCTTT 187813
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| ||||||| || | || || |||| |||||| ||||||| |||||
Sbjct 187814 GCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCC 187873
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 187874 ACCCTGCACCTGGT 187887
>seq1424
Length=2309046
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| ||||||||||| |||||| ||||
Sbjct 23651 AAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGTGACACCATCGAGAAT 23592
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||| || || ||| || || || |||||
Sbjct 23591 GTAAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAGCAGAGGCTCATCTTT 23532
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| | ||||| |||||
Sbjct 23531 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATTCAGAAGGAGTCG 23472
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 23471 ACCCTGCATCTGGT 23458
>seq2201
Length=851120
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| |||||||| || | || || | || || | ||||||||| | |||
Sbjct 771152 AAGATCCAAGACAAAGAAGGCATCTCCCCTGATGAACAGAGGCCGATCTTCGCCAGGAAG 771211
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCT 206369
||| |||||||||| | || ||| || | |||||| |||||||||||||||||
Sbjct 771212 CAGCTGGAAGATGGGCGCACCTTGTCCAACTACAACAGGCAGAAAGAGTCTACTCT 771267
>seq2069
Length=3899032
Score = 84.2 bits (92), Expect = 5e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 206174 AGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA 206233
|||| ||| ||||| | | || || || ||| || | || || ||| || ||||
Sbjct 1248661 AGATTTTTGTGAAAACCCATATGGGGAAGACCATCGCTCTTGAGGTAGAACCTTTGGACA 1248602
Query 206234 CAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAA 206293
|| | | |||||| ||||| | | || ||||||||| || || ||||
Sbjct 1248601 CAAAAGCAAATGTAAAGGCCAAGATCTAGGGTAAGGAAGGAATTCCTCCTGATCAGCAAA 1248542
Query 206294 GACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCC 206353
|||| | ||| ||||| ||||| ||||||||||| |||||| | | |||| |
Sbjct 1248541 GACTGACCTTTGCCGGCAAGCAACTGGAAGATGGACATACTTTGTCTGGCTACA---TTA 1248485
Query 206354 AGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| |||||||||||||||| ||||| |||||||||||
Sbjct 1248484 AAAAAGAGTCTACTCTTC-TCTTGTGTTGAGACTTCG 1248449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181783096223290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |