Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1767 109 1e-18 seq1 98.7 2e-15 seq2080 93.3 1e-13 seq1689 91.5 3e-13 seq2363 89.7 1e-12 seq1424 89.7 1e-12 seq2201 87.8 4e-12 seq2069 84.2 5e-11 >seq1767 Length=1785757 Score = 109 bits (120), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCA-CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||||| || | |||| || || ||||| | || || ||| || | ||| | ||| Sbjct 524001 AAAACCCTTAACAGGGAAGACCTTCACTCTTGAGGTTGAACCCTCGGTTACAATAGAAAA 523942 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| ||||| || || || ||||||||| || || | |||||| ||||| Sbjct 523941 TGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCGAAGACTGATCTT 523882 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || | || || |||||||||||| | || ||| | || |||||| | || || ||||| Sbjct 523881 TGCTGACAAACAATTGGAAGATGGATGTACCTTGTCTGACTACAACATTCAAAAGGAGTC 523822 Query 206364 TACTCTTCACCTTGTTTTGAGACTT 206388 ||||||||| ||||| ||||||||| Sbjct 523821 TACTCTTCATCTTGTGTTGAGACTT 523797 >seq1 Length=8996366 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || | ||||| || || ||||| || ||| | | || | ||| || | Sbjct 4848615 CAGATTTTCTTGAAAACTCTTACCGGAAAGACCGTCATTCTCGAGATTGAAGCTTTGGTT 4848674 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| || ||||| ||||||||| | ||| ||| Sbjct 4848675 ACAATAGAAAATGTAAAGGCCAAGATCCAGGAAAAGGAAGGAATTCCTTCTGACCAGCAA 4848734 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || ||||| ||||||||||| | || ||| | || ||| || | Sbjct 4848735 GTATTGATCTTTGCTGGCAAGCAATTGGAAGATGGGTGTACCTTGTCTGACTACCACATT 4848794 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 || || |||| ||||||||| |||| |||||||||| Sbjct 4848795 CAAAAGGAGTTTACTCTTCATCTTGCGTTGAGACTTC 4848831 >seq2080 Length=3818131 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 ||||| ||||| || || |||||||||||| || || ||||| || ||||| | Sbjct 1111649 TAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCAGCAAAGGCTGATCTTTG 1111708 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 | || ||||| ||||||||||| ||| | | || ||| || | || || ||||| | Sbjct 1111709 CTGGCAAGCAACTGGAAGATGGACATACTCTATCTGACTACGACATTCAAAAGGAGTCCA 1111768 Query 206366 CTCTTCACCTTGTTTTGAGACTTC 206389 ||||||| ||||| |||||||||| Sbjct 1111769 CTCTTCATCTTGTGTTGAGACTTC 1111792 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| ||||| |||||||| ||||| || || | | ||||||| | ||| Sbjct 1111792 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTCGTAGTCAGATAGAGTAT 1111733 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||| ||||| || || ||||| |||| ||| ||| Sbjct 1111732 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGA 1111689 >seq1689 Length=2064527 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACA-GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| || | ||||| || ||| || || || || ||| | || || ||| | || Sbjct 174969 CAGATTTTCTTGAAAACCCTTACAAGGGAAGACCATTACTCTCGAGGTTGAAGCCTTGGA 174910 Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | | | ||||| ||||| || | || ||||||||| || | || Sbjct 174909 TACAATAGGAGATATAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTCATCAGCA 174850 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||| ||||| || || ||||| ||||||||||| || ||| | ||||||| | | Sbjct 174849 AAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACCTTGTCTGATTACAGCAT 174790 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 || || ||||| |||||||| || || ||||||||| Sbjct 174789 TCAAAAGGAGTCCACTCTTCATCTCGTGTTGAGACTT 174753 >seq2363 Length=646923 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| ||||| |||| Sbjct 187694 AAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGCGACACCATCGAGAAC 187753 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| || || ||| || || || ||||| Sbjct 187754 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGGCTGATCTTT 187813 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| ||||||| || | || || |||| |||||| ||||||| ||||| Sbjct 187814 GCCGGAAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCC 187873 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 187874 ACCCTGCACCTGGT 187887 >seq1424 Length=2309046 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| ||||||||||| |||||| |||| Sbjct 23651 AAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGTGACACCATCGAGAAT 23592 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||| || || ||| || || || ||||| Sbjct 23591 GTAAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAGCAGAGGCTCATCTTT 23532 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| | ||||| ||||| Sbjct 23531 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATTCAGAAGGAGTCG 23472 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 23471 ACCCTGCATCTGGT 23458 >seq2201 Length=851120 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| || | || || | || || | ||||||||| | ||| Sbjct 771152 AAGATCCAAGACAAAGAAGGCATCTCCCCTGATGAACAGAGGCCGATCTTCGCCAGGAAG 771211 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCT 206369 ||| |||||||||| | || ||| || | |||||| ||||||||||||||||| Sbjct 771212 CAGCTGGAAGATGGGCGCACCTTGTCCAACTACAACAGGCAGAAAGAGTCTACTCT 771267 >seq2069 Length=3899032 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 206174 AGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA 206233 |||| ||| ||||| | | || || || ||| || | || || ||| || |||| Sbjct 1248661 AGATTTTTGTGAAAACCCATATGGGGAAGACCATCGCTCTTGAGGTAGAACCTTTGGACA 1248602 Query 206234 CAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAA 206293 || | | |||||| ||||| | | || ||||||||| || || |||| Sbjct 1248601 CAAAAGCAAATGTAAAGGCCAAGATCTAGGGTAAGGAAGGAATTCCTCCTGATCAGCAAA 1248542 Query 206294 GACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCC 206353 |||| | ||| ||||| ||||| ||||||||||| |||||| | | |||| | Sbjct 1248541 GACTGACCTTTGCCGGCAAGCAACTGGAAGATGGACATACTTTGTCTGGCTACA---TTA 1248485 Query 206354 AGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | |||||||||||||||| ||||| ||||||||||| Sbjct 1248484 AAAAAGAGTCTACTCTTC-TCTTGTGTTGAGACTTCG 1248449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181783096223290