Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 89.7 5e-13
seq1841 87.8 2e-12
seq2363 84.2 2e-11
>seq1424
Length=2309046
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||| ||| | | | |||||||| ||||||||||| || | || || ||| ||
Sbjct 22774 ACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 22833
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|||||||| || | | |||| || | ||| || |||||||| |||||||| |||||
Sbjct 22834 AGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGG 22893
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || |||| | || | || || | || |||||||| | || | || ||
Sbjct 22894 ATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTG 22953
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| ||||| || || | ||||||||||||
Sbjct 22954 CCGGTCAGGGTCTTCACGAAAATCTGCAT 22982
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| ||| | | | |||||||| |||||||||||||| | || || |
Sbjct 22996 CGCAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCA 23055
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || |||||||| || | | |||| || | ||| || || ||||| || ||||| |||
Sbjct 23056 TCCTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTA 23115
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | || | || || | || |||||||| | || |
Sbjct 23116 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATG 23175
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| || || | ||| ||||||||
Sbjct 23176 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210
>seq1841
Length=1603521
Score = 87.8 bits (96), Expect = 2e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| || ||||| | ||||||||||||||||| || ||||| |||||||| |||
Sbjct 624169 TACTCTACTATTTCTGTACACAGGTTGCTGCATTTGATTGTTCCCAGGTTTTGCTGGTTG 624228
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615
|| |||||||| || | |||||| |||||||||| || || ||||||
Sbjct 624229 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCG 624279
>seq2363
Length=646923
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|||||| | |||| || | | | ||||| || || |||||||||||| || ||| ||
Sbjct 187897 CAAGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 187838
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||||| ||||| || |||| | |||| || | ||| || || || || ||||||||
Sbjct 187837 GCCGTCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTC 187778
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|| || || || || | | || | || ||| | |||||||| || | ||
Sbjct 187777 CTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGT 187718
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || ||||| ||||| || || | ||| ||||||||
Sbjct 187717 GATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476596365476400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |