Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq2337 82.4 7e-11 >seq2337 Length=679044 Score = 82.4 bits (90), Expect = 7e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || || || ||||| |||||||||||||| ||||||||||||||||||| Sbjct 371770 AGCTCCAAGAGAAAGGGGTCTACAAAGCCATGAGCGAGTTTGACATCTTCATCAACTACA 371829 Query 133371 TAGAGACATATACCACCATGAA-ATGA 133396 |||| || || | || ||||| |||| Sbjct 371830 TAGAAACCTACATGACAATGAAGATGA 371856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447797261876400