Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2363 140 3e-28 seq1424 111 1e-19 seq1 91.5 1e-13 seq54 82.4 7e-11 >seq2363 Length=646923 Score = 140 bits (154), Expect = 3e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 187642 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 187583 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 187582 GATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 187523 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 187522 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 187463 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 187462 GAAGATCTGCAT 187451 Score = 138 bits (152), Expect = 1e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 187081 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 187022 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 187021 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 186962 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 186961 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 186902 Query 35725 AAATATCTGCATTC 35738 || |||||||||| Sbjct 186901 GAAGATCTGCATTC 186888 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 186634 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 186575 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 186574 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 186515 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 186514 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 186455 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 186454 GAAGATCTGCAT 186443 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 186862 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 186803 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 186802 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 186743 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 186742 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 186683 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 186682 GAAGATCTGCAT 186671 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 187309 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 187250 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 187249 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 187190 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 187189 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 187130 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 187129 GAAGATCTGCAT 187118 Score = 132 bits (146), Expect = 4e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 186406 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 186347 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 186346 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 186287 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || || | ||||| || ||||| Sbjct 186286 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTCCGCGTCAGGGTCTTCAC 186227 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 186226 GAAGATCTGCATT 186214 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || ||||| Sbjct 187870 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCAAA 187811 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || |||||||| |||||| ||| | | Sbjct 187810 GATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 187751 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | |||||||||| ||||| || ||||| |||| || ||||| Sbjct 187750 CTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCAC 187691 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 187690 GAAGATCTGCAT 187679 >seq1424 Length=2309046 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 23475 CTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 23534 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || ||||| ||| |||||| ||| | | | Sbjct 23535 GATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTTACATT 23594 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||| |||| ||||| || || || |||| || ||||| Sbjct 23595 CTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 23654 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 23655 GAAGATTTGCATTTTG 23670 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| | | || || | || |||||||| || || ||||| Sbjct 22791 CTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAA 22850 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || ||||| ||| |||||| ||||| | | Sbjct 22851 GATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 22910 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||| |||| ||||| || || || |||| || ||||| Sbjct 22911 CTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 22970 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22971 GAAAATCTGCAT 22982 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | | || || | || |||||||| || || ||||| Sbjct 23019 CTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAA 23078 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||||| | ||||| ||| |||||| ||||| | | Sbjct 23079 GATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGCCTTCACATT 23138 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||| |||| ||||| || || || |||| || ||||| Sbjct 23139 CTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 23198 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 23199 GAAGATCTGCAT 23210 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || | || |||||||| || || ||||| Sbjct 23247 CTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAA 23306 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||||| ||| |||||| ||||| | | Sbjct 23307 GATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 23366 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||| | ||||| || || || |||| || ||||| Sbjct 23367 CTCAATGGTGTCACTTGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 23426 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 23427 GAAGATCTGCAT 23438 >seq1 Length=8996366 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 ||| | |||||| | | |||||| | | ||| | ||| |||||||||||||| ||| Sbjct 4848844 TTAGTACCACCATGAAGTCTCAACGCAAGATGAAGAGTAAACTCCTTTTGAATGTGGTAG 4848785 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | |||||| | | | || |||| ||||| || ||||| ||||| |||||||| Sbjct 4848784 TCAGACAAGGTACACCCATCTTCCAATTGCTTGCCAGCAAAGATCAATACTTGCTGGTCA 4848725 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 ||||||| | ||||| ||| |||||| ||| | | || | | || | | | Sbjct 4848724 GAAGGAATTCCTTCCTTTTCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCAAAGCT 4848665 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||| | ||| || || || || | |||||||| || |||||||| Sbjct 4848664 TCAATCTCGAGAATGACGGTCTTTCCGGTAAGAGTTTTCAAGAAAATCTGCAT 4848612 >seq54 Length=460634 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||||| || ||| |||| |||| ||||||||||| | |||| || ||||||||| Sbjct 180470 TCCAGCTGTTTGCCCACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 180411 Query 35645 ATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 ||| ||| || || | | || | | ||||| || | | |||| | ||||| || Sbjct 180410 TGGAT-TTTAGCTTTGACATTTTCGATGGTGTCACT-GGCTGGACCTTGAGTGTGATGGT 180353 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT-TCTG 35740 || ||||||| || |||||||| |||||||| |||| Sbjct 180352 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTG 180315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450779569049200