Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 107 2e-18
seq654 104 2e-17
>seq1669
Length=5184857
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || ||||| | ||||||||| |||||||| || ||||| ||||| || ||||| |||
Sbjct 4062937 GTGGCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCGGGATCCTTTGCTGCTATATTCTGG 4062996
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
||||||||| ||||| | |||||||| | || ||||| ||||| | || || | |||
Sbjct 4062997 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTCATCAGCAGAGAT 4063056
Query 44255 GAAG 44258
||||
Sbjct 4063057 GAAG 4063060
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||||||||| || ||||| || ||||| || ||||| |
Sbjct 4069429 AAAATCCCTTTGATTTTATGGAAAATATTTCTTTAGAAGGAAAGACAAATTTCTTTGAGA 4069488
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 4069489 AACGAGTTTCAGAGTATCAGCG 4069510
>seq654
Length=93227
Score = 104 bits (114), Expect = 2e-17
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963
|||||| ||||||||||| | ||||||| || ||||| || || || |||||||||
Sbjct 52999 CGGTTTAGCCAAGAAGTTCAGATCACAGAAGCCCGCTGTTTCTACGGCTTCCAAATTGCC 53058
Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| || ||||| |||||||| ||||| || || || || ||||| ||||||
Sbjct 53059 ATGGAAAACATACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGAT 53115
Score = 102 bits (112), Expect = 6e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|||||||| ||||||| ||||| | |||||||| || |||||||| || || |||||
Sbjct 53911 GGAGAACGTGTTGTCGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 53970
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| |
Sbjct 53971 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTCCAATGAACTT 54030
Query 44243 ATAAGTCGTGATGA 44256
|| || | |||||
Sbjct 54031 ATTAGCAGAGATGA 54044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397443938452450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |