Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1841 86.0 5e-12 seq1424 82.4 6e-11 >seq1841 Length=1603521 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131041 GCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGC 131100 ||| |||||||| ||||| |||||||||||||| ||||| ||||| ||| | || Sbjct 620937 GCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGC 620996 Query 131101 TTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCC 131160 | ||||| ||||| | |||| | ||||||||||||||| ||||| |||| ||| Sbjct 620997 CTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCGTCTGCCAGACCTTGTACCCC 621056 Query 131161 AA 131162 || Sbjct 621057 AA 621058 >seq1424 Length=2309046 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || || || ||||| ||||| || | |||| | Sbjct 23452 CGCAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCA 23511 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || || || | ||||| | ||| || || || || | || || ||| Sbjct 23512 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTA 23571 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| ||| ||| ||||| || || || Sbjct 23572 TCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATG 23631 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| ||||| || ||||| ||||||||||| Sbjct 23632 GTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 23666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921504568880