Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1841 89.7 6e-13
seq654 82.4 9e-11
>seq1841
Length=1603521
Score = 89.7 bits (98), Expect = 6e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963
||||||| |||||||| ||||| ||||||||||| |||||||| ||||||| | ||||
Sbjct 624289 AGTCTCAGACCGAGACAGGTACCCCATACATGCTCTACAAAGATTCCTGTAATCGGAAGA 624230
Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023
| || || | || |||| ||||| | ||| || ||||||||||| | || |
Sbjct 624229 GCAACCAGCAAAACCTGGGAACAATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGT 624170
Query 105024 TTACAGACAAAGATGAG 105040
||| ||||||||||
Sbjct 624169 ATACCAGCAAAGATGAG 624153
>seq654
Length=93227
Score = 82.4 bits (90), Expect = 9e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 95170 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 95229
||||||||||||||||||||||||||| || || ||||| || |||||||| || |||
Sbjct 55358 AATCCATTTGACTTCATGGAGAACATTTCACTGGAAGGGAAAACTAACTTCTTTGAGAAG 55417
Query 95230 AGGGTTGGGGACTATGGCAAGATGG 95254
|| || || || ||| |||||||
Sbjct 55418 AGAGTGGGCGAGTATCAGAAGATGG 55442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583242646007600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |