Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1989 100 2e-16 >seq1989 Length=1255173 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 ||||||||||| |||||||| ||||| || ||| || || ||||| || |||||||| Sbjct 654421 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCA 654362 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAA 111900 |||||||||||| | || || || || ||||| || || || | | | |||||| Sbjct 654361 AGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAG 654302 Query 111901 AATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 || || ||||| |||| || ||||| | ||||| Sbjct 654301 AACTGGCAAAGGGCATGGCACGGAGGTAGGGCCAT 654267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391933705675870