Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq1837 98.7 1e-15
>seq1837
Length=1607474
Score = 98.7 bits (108), Expect = 1e-15
Identities = 236/355 (66%), Gaps = 4/355 (1%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
||||| || |||||||| |||||||| || || || || || ||| | || |||||
Sbjct 103426 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCAATAGCATATTCCATAGTGGTTCATCACAAA 103485
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||| ||| | || | ||||||||||||||||| || ||||| |||| ||| |
Sbjct 103486 ATCGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 103545
Query 13791 CACGTGGACTCCAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGT 13848
|| |||||| || || | || | || | | || | | | ||| || |
Sbjct 103546 CATGTGGACAAAAAATCAGAGGATTCCTTTTTGGCTGCGGTGATT--GGCATTGCATCCT 103603
Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908
| ||| ||| || ||||| | |||| | |||||||| | || |||||||
Sbjct 103604 GTTTCAATAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCATCATGGAGTC 103663
Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968
| || ||||||||||||| ||| ||| |||||| || | || |||| ||
Sbjct 103664 GGGTCCAGGCCGACCTCAACTGTATGCAGGACCTCTACAGAATGAGTGCAAACTGGAAGT 103723
Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGT 14023
|| || | || || || || ||||| || || | || ||||||||||| || ||
Sbjct 103724 ACTTGATAAATCTTTGTGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGT 103778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658718696742400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |