Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1989 132 4e-26
seq2095 96.9 3e-15
>seq1989
Length=1255173
Score = 132 bits (146), Expect = 4e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 29948 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 30007
|||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| || ||
Sbjct 654421 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCA 654362
Query 30008 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAA 30067
|| ||||| || | ||||||||||| ||||| || || ||||| || | ||| ||
Sbjct 654361 AGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAG 654302
Query 30068 AACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
||||| || | ||| ||||||||||| || ||||||||
Sbjct 654301 AACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAG 654264
>seq2095
Length=1036233
Score = 96.9 bits (106), Expect = 3e-15
Identities = 411/643 (64%), Gaps = 36/643 (6%)
Strand=Plus/Plus
Query 29864 AGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGG 29923
||||| | ||||| ||||| || || ||| || | ||| || ||| | | | ||
Sbjct 1015216 AGCTGCATTTTCAGTGGTTCAGTGTCATTCAGATAAATGTGCGCATCTTCTAAAGTATGT 1015275
Query 29924 ACAAACTCTCCCGGT-TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29982
||||| || || ||| |||| ||| ||| | |||||||| | ||| || || ||
Sbjct 1015276 ACAAAGTCATTTGGCGTCTGGCCCA-TGATGTGTGTGATCATGTA-GAGAGCAGGGAATA 1015333
Query 29983 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
|||||||||||| ||||| |||| || |||| || | | |||||||| ||
Sbjct 1015334 GCTGGCGATGTTGAAGGGCCCCCCCAGGCCCAGATCTGCTGGCCTCTGGTT-------CA 1015386
Query 30043 CGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102
|| | || ||||| || | || |||||| || | || || |
Sbjct 1015387 CG------------------CCTAGAACTGGCAAAGGGTATGGCACCGAAGTAGGGC--T 1015426
Query 30103 GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30161
||| ||| ||||| || ||||| |||| || |||||| | |||| || |||||
Sbjct 1015427 GAGAA--AAGATCTTTCGGTTTCCAAGCGCTCAGGATGATTCTTTTGTCATCACGGTTGG 1015484
Query 30162 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30221
| || | ||| | | ||| |||| || || || || || || || ||
Sbjct 1015485 TTTCGAACATGTCAATCACCTTTGGCAG-TGGTCTACTCCTTGACCTGAATAACCTTAAT 1015543
Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281
||| || |||| ||||| || |||||||||||| | || || || || || | ||
Sbjct 1015544 CCATATCTTTGTATTCTGCCCCAAAATGCCTCCACCGAAAGCCATAAACTAAGCCTAAGT 1015603
Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
| || |||| ||| ||| | |||||| |||||| ||| | ||||| |
Sbjct 1015604 CCCCTTCTTTTCTGCAGGAGAATTCTAGGCTGTCCAGAAAGTCATAGGACTCATTGGCAT 1015663
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAAC 30400
|||||| | || | || || || ||||| | |||||| | ||||| || |||
Sbjct 1015664 CCCAGAATCTCACTTCTTTGGATGACAGTTCTTTAGCATTTGTGTATCCCTC-GATAAAC 1015722
Query 30401 CACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30460
||||| | |||||||| || ||||||| || || | || || || || || |||||
Sbjct 1015723 CACAGTAACTCCTCCAAAACACCCTTCCAGAATACACGTTTAGTTGTCAGCAGAGGAAAT 1015782
Query 30461 TGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAACACGGACA 30503
| | | |||| ||| | ||||| | | ||||| ||||
Sbjct 1015783 TCATCTCTCAGGCTGTAGCACGCCTGCGTGCGGAACACCGACA 1015825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406298069749080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |