Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2095 150 2e-31 seq1989 147 2e-30 seq1960 107 2e-18 >seq2095 Length=1036233 Score = 150 bits (166), Expect = 2e-31 Identities = 304/445 (68%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 6731 TAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTC 6790 ||||| ||||| ||||| |||||| | | || || | ||| ||||| ||||| ||| Sbjct 1015391 TAGAACTGGCAAAGGGTATGGCACCGAAGTAGGGC--TGAGAAA-AGATCTTTCGGTTTC 1015447 Query 6791 CACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC-AAGGTGTCGATCACGTA 6849 || |||| || | ||| ||| |||||||| |||| | ||| || |||| ||||| | Sbjct 1015448 CAAGCGCTCAGGATGATTCTTTTGTCATCACGGTTG-GTTTCGAACATGTCAATCACCTT 1015506 Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 |||| ||||| |||| || || ||||| | || | | || || ||||| Sbjct 1015507 TGGCAG-TGGTCTACTCCTTGACCTGAATAACCTTAATCCATATCTTTGTATTCTGCCCC 1015565 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969 ||| || |||||| | || || || || ||| ||||| || || | | | | ||| Sbjct 1015566 AAAATGCCTCCACCGAAAGCCATAAACTAAGCCTAAGTCCCCTTCTTTTCTGCAGGAGAA 1015625 Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029 | | ||||||||||||| ||| | | || ||||||| |||| | ||| Sbjct 1015626 TTCTAGGCTGTCCAGAAAGTCATAGGACTCATTGGCATCCCAGAATCTCACTTCTTTGGA 1015685 Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCC 7089 || || || || | || ||| ||| | |||||||| | |||||| | || || Sbjct 1015686 TGACAGTTCTTTAGCATTTGTGTATCCCTCGATAAACCACAGTAACTCCTCCAAAACACC 1015745 Query 7090 CTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGC 7149 ||||||| | |||||||| || |||||||| |||||||| | | ||| |||| | || Sbjct 1015746 CTTCCAGAATACACGTTTAGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCACGC 1015805 Query 7150 CTGTGTGCCGAACACGGAGAGGGTC 7174 ||| |||| |||||| || |||||| Sbjct 1015806 CTGCGTGCGGAACACCGACAGGGTC 1015830 Score = 150 bits (166), Expect = 2e-31 Identities = 304/445 (68%), Gaps = 6/445 (1%) Strand=Plus/Minus Query 34171 GACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCT 34230 |||||| || |||||| |||| ||||| | |||| ||| | | |||||||| ||||| Sbjct 1015830 GACCCTGTCGGTGTTCCGCACGCAGGCGTGCTACAGCCTGAGAGATGAATTTCCTCTGCT 1015771 Query 34231 GACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGG 34290 ||| || |||||||| | ||||||||| || | |||||| | |||||||| | ||| Sbjct 1015770 GACAACTAAACGTGTATTCTGGAAGGGTGTTTTGGAGGAGTTACTGTGGTTTATCGAGGG 1015711 Query 34291 GGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTC 34350 ||| || | || || || || ||| | |||| ||||||| || | | ||| Sbjct 1015710 ATACACAAATGCTAAAGAACTGTCATCCAAAGAAGTGAGATTCTGGGATGCCAATGAGTC 1015651 Query 34351 TCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGT 34410 ||||||||||||| | | ||| | | | | || || ||||| ||| || Sbjct 1015650 CTATGACTTTCTGGACAGCCTAGAATTCTCCTGCAGAAAAGAAGGGGACTTAGGCTTAGT 1015591 Query 34411 CTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTC 34470 || || || | |||||| || |||||||| || || | | || | ||||| Sbjct 1015590 TTATGGCTTTCGGTGGAGGCATTTTGGGGCAGAATACAAAGATATGGATTAAGGTTATTC 1015531 Query 34471 GGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT-GAAGCGGAACCCTGATG 34529 || || |||| ||||| |||| | ||||| |||| || ||| | |||| ||||| Sbjct 1015530 AGGTCAAGGAGTAGACCA-CTGCCAAAGGTGATTGACATGTTCGAAAC-CAACCGTGATG 1015473 Query 34530 ACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCC 34589 ||| ||| ||| | || |||| ||||| ||||| ||||| ||| | || || | | Sbjct 1015472 ACAAAAGAATCATCCTGAGCGCTTGGAAACCGAAAGATCT-TTTCTCA--GCCCTACTTC 1015416 Query 34590 CGTGCCACACCCTCTGCCAATTCTA 34614 |||||| ||||| ||||| ||||| Sbjct 1015415 GGTGCCATACCCTTTGCCAGTTCTA 1015391 >seq1989 Length=1255173 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||| ||||| || || |||||||| |||| ||||| ||||| || | |||| Sbjct 654255 GATCTTCCTCTCATGGCCCTACCTCCGTGCCATGCCCTTTGCCAGTTCTATGTGGTGAAT 654314 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || | ||| ||||| | || ||||| ||| Sbjct 654315 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGCAGATATGGGCCTTGGTGTGCCCTTC 654374 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 654375 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 654415 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| || | ||| Sbjct 654415 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCAAGGCCC 654356 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || ||| | || | || || ||||||||||||||||| |||||| | || ||||| ||| Sbjct 654355 ATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAGAACTGG 654296 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| |||||||| || || ||||| ||||| ||||| Sbjct 654295 CAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGGAAGATC 654255 >seq1960 Length=1325267 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||| | | ||||| | || | ||||||||||| ||||| | | ||| Sbjct 896332 TGTGCAATCATGAAGG--AGCAGGGAATATTTGGCAATGTTGAAGGGCACACTCAGGCCC 896389 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | |||| || || ||||||||||||||||| | ||| | || ||| ||| Sbjct 896390 ATGTCTGCTGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACACAGAGCTGG 896449 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799 || |||| || || | || || ||||| |||| | ||| || || ||||| | ||| Sbjct 896450 CAAAGGGCATGACAGAGAGGCAGGGCCATGCGAGGAAAATCTTTTGGATTCCAAGAACAC 896509 Query 6800 ATCACGATCCTTCTGTCATCAGGGTT 6825 | | ||| |||||||||| ||||| Sbjct 896510 AGGATGATTCTTCTGTCATTGGGGTT 896535 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 ||||| |||||||||| ||| | |||| | ||||| || || ||| | |||| ||| Sbjct 896535 AACCCCAATGACAGAAGAATCATCCTGTGTTCTTGGAATCCAAAAGATTTTCCTCGCATG 896476 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 || || || | || || |||| ||||| ||| || | ||| | |||||||||||| Sbjct 896475 GCCCTGCCTCTCTGTCATGCCCTTTGCCAGCTCTGTGTGGTGAACAGTGAGCTGTCCTGC 896416 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 ||||| || || |||| | ||||||||| | | ||||| ||||||||||| | || Sbjct 896415 CAGCTGTACCAGAGATCAGCAGACATGGGCCTGAGTGTGCCCTTCAACATTGCCAAATAT 896356 Query 34700 GCTCTGCTCACGTACATGATCGCTCA 34725 | ||||| | | |||||| || || Sbjct 896355 TCCCTGCT--CCTTCATGATTGCACA 896332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448248447832800