Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2095 150 2e-31
seq1989 147 2e-30
seq1960 107 2e-18
>seq2095
Length=1036233
Score = 150 bits (166), Expect = 2e-31
Identities = 304/445 (68%), Gaps = 6/445 (1%)
Strand=Plus/Plus
Query 6731 TAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTC 6790
||||| ||||| ||||| |||||| | | || || | ||| ||||| ||||| |||
Sbjct 1015391 TAGAACTGGCAAAGGGTATGGCACCGAAGTAGGGC--TGAGAAA-AGATCTTTCGGTTTC 1015447
Query 6791 CACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC-AAGGTGTCGATCACGTA 6849
|| |||| || | ||| ||| |||||||| |||| | ||| || |||| ||||| |
Sbjct 1015448 CAAGCGCTCAGGATGATTCTTTTGTCATCACGGTTG-GTTTCGAACATGTCAATCACCTT 1015506
Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909
|||| ||||| |||| || || ||||| | || | | || || |||||
Sbjct 1015507 TGGCAG-TGGTCTACTCCTTGACCTGAATAACCTTAATCCATATCTTTGTATTCTGCCCC 1015565
Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969
||| || |||||| | || || || || ||| ||||| || || | | | | |||
Sbjct 1015566 AAAATGCCTCCACCGAAAGCCATAAACTAAGCCTAAGTCCCCTTCTTTTCTGCAGGAGAA 1015625
Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029
| | ||||||||||||| ||| | | || ||||||| |||| | |||
Sbjct 1015626 TTCTAGGCTGTCCAGAAAGTCATAGGACTCATTGGCATCCCAGAATCTCACTTCTTTGGA 1015685
Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCC 7089
|| || || || | || ||| ||| | |||||||| | |||||| | || ||
Sbjct 1015686 TGACAGTTCTTTAGCATTTGTGTATCCCTCGATAAACCACAGTAACTCCTCCAAAACACC 1015745
Query 7090 CTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGC 7149
||||||| | |||||||| || |||||||| |||||||| | | ||| |||| | ||
Sbjct 1015746 CTTCCAGAATACACGTTTAGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCACGC 1015805
Query 7150 CTGTGTGCCGAACACGGAGAGGGTC 7174
||| |||| |||||| || ||||||
Sbjct 1015806 CTGCGTGCGGAACACCGACAGGGTC 1015830
Score = 150 bits (166), Expect = 2e-31
Identities = 304/445 (68%), Gaps = 6/445 (1%)
Strand=Plus/Minus
Query 34171 GACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCT 34230
|||||| || |||||| |||| ||||| | |||| ||| | | |||||||| |||||
Sbjct 1015830 GACCCTGTCGGTGTTCCGCACGCAGGCGTGCTACAGCCTGAGAGATGAATTTCCTCTGCT 1015771
Query 34231 GACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGG 34290
||| || |||||||| | ||||||||| || | |||||| | |||||||| | |||
Sbjct 1015770 GACAACTAAACGTGTATTCTGGAAGGGTGTTTTGGAGGAGTTACTGTGGTTTATCGAGGG 1015711
Query 34291 GGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTC 34350
||| || | || || || || ||| | |||| ||||||| || | | |||
Sbjct 1015710 ATACACAAATGCTAAAGAACTGTCATCCAAAGAAGTGAGATTCTGGGATGCCAATGAGTC 1015651
Query 34351 TCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGT 34410
||||||||||||| | | ||| | | | | || || ||||| ||| ||
Sbjct 1015650 CTATGACTTTCTGGACAGCCTAGAATTCTCCTGCAGAAAAGAAGGGGACTTAGGCTTAGT 1015591
Query 34411 CTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTC 34470
|| || || | |||||| || |||||||| || || | | || | |||||
Sbjct 1015590 TTATGGCTTTCGGTGGAGGCATTTTGGGGCAGAATACAAAGATATGGATTAAGGTTATTC 1015531
Query 34471 GGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT-GAAGCGGAACCCTGATG 34529
|| || |||| ||||| |||| | ||||| |||| || ||| | |||| |||||
Sbjct 1015530 AGGTCAAGGAGTAGACCA-CTGCCAAAGGTGATTGACATGTTCGAAAC-CAACCGTGATG 1015473
Query 34530 ACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCC 34589
||| ||| ||| | || |||| ||||| ||||| ||||| ||| | || || | |
Sbjct 1015472 ACAAAAGAATCATCCTGAGCGCTTGGAAACCGAAAGATCT-TTTCTCA--GCCCTACTTC 1015416
Query 34590 CGTGCCACACCCTCTGCCAATTCTA 34614
|||||| ||||| ||||| |||||
Sbjct 1015415 GGTGCCATACCCTTTGCCAGTTCTA 1015391
>seq1989
Length=1255173
Score = 147 bits (162), Expect = 2e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||| ||||| || || |||||||| |||| ||||| ||||| || | ||||
Sbjct 654255 GATCTTCCTCTCATGGCCCTACCTCCGTGCCATGCCCTTTGCCAGTTCTATGTGGTGAAT 654314
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || | ||| ||||| | || ||||| |||
Sbjct 654315 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGCAGATATGGGCCTTGGTGTGCCCTTC 654374
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| |||||||| ||||||||||| ||
Sbjct 654375 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 654415
Score = 147 bits (162), Expect = 2e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| ||||| || || |||||||| ||||| || | |||
Sbjct 654415 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCAAGGCCC 654356
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|| ||| | || | || || ||||||||||||||||| |||||| | || ||||| |||
Sbjct 654355 ATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAGAACTGG 654296
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||||| || || ||||| ||||| |||||
Sbjct 654295 CAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGGAAGATC 654255
>seq1960
Length=1325267
Score = 107 bits (118), Expect = 2e-18
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||| | | ||||| | || | ||||||||||| ||||| | | |||
Sbjct 896332 TGTGCAATCATGAAGG--AGCAGGGAATATTTGGCAATGTTGAAGGGCACACTCAGGCCC 896389
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||| | |||| || || ||||||||||||||||| | ||| | || ||| |||
Sbjct 896390 ATGTCTGCTGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACACAGAGCTGG 896449
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799
|| |||| || || | || || ||||| |||| | ||| || || ||||| | |||
Sbjct 896450 CAAAGGGCATGACAGAGAGGCAGGGCCATGCGAGGAAAATCTTTTGGATTCCAAGAACAC 896509
Query 6800 ATCACGATCCTTCTGTCATCAGGGTT 6825
| | ||| |||||||||| |||||
Sbjct 896510 AGGATGATTCTTCTGTCATTGGGGTT 896535
Score = 107 bits (118), Expect = 2e-18
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579
||||| |||||||||| ||| | |||| | ||||| || || ||| | |||| |||
Sbjct 896535 AACCCCAATGACAGAAGAATCATCCTGTGTTCTTGGAATCCAAAAGATTTTCCTCGCATG 896476
Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639
|| || || | || || |||| ||||| ||| || | ||| | ||||||||||||
Sbjct 896475 GCCCTGCCTCTCTGTCATGCCCTTTGCCAGCTCTGTGTGGTGAACAGTGAGCTGTCCTGC 896416
Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699
||||| || || |||| | ||||||||| | | ||||| ||||||||||| | ||
Sbjct 896415 CAGCTGTACCAGAGATCAGCAGACATGGGCCTGAGTGTGCCCTTCAACATTGCCAAATAT 896356
Query 34700 GCTCTGCTCACGTACATGATCGCTCA 34725
| ||||| | | |||||| || ||
Sbjct 896355 TCCCTGCT--CCTTCATGATTGCACA 896332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448248447832800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |