Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq1719 224 8e-54
seq2449 113 4e-20
>seq1719
Length=1953405
Score = 224 bits (248), Expect = 8e-54
Identities = 207/262 (79%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 1269 GAAACGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAA 1328
||||| | || |||||| | ||||| |||||||| ||| | ||||| ||||||||||
Sbjct 1467776 GAAACTTCCCATGAAGTTTTGATTGTGACATGGCAGAAAATCAAAGCTGTAAGCCCAGAA 1467717
Query 1329 AACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAA 1388
|||||||| || || || || |||| || ||||| || ||| | || || || |||||
Sbjct 1467716 AACATGGCTACCTTCAGCAAGAACCATGGAGTTGTGGTCCAGACTGCCTATAAGGATAAG 1467657
Query 1389 ATGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTG 1448
|| ||||| |||||||| ||||| || | | |||| || ||||||||||| || || |||
Sbjct 1467656 ATAAACATCACTGAGCTGGGACTCCAGAGCTCAACCATTACCTTCTGGAATACTACGTTG 1467597
Query 1449 GATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGA 1508
|||||||| ||||| |||||||| | || || |||||||| |||||||| || ||||||
Sbjct 1467596 GATGATGAGGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAAATCTCAGGA 1467537
Query 1509 ATAGGGTGTCTAACCCTTTTTG 1530
|||| ||||| ||||| ||||
Sbjct 1467536 ATAGCATGTCTCACCCTCTTTG 1467515
>seq2449
Length=553460
Score = 113 bits (124), Expect = 4e-20
Identities = 109/140 (78%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||| ||| | |||||||| ||||||||| | ||||| || |||||||||
Sbjct 265154 GTGGTGGAGGAGCTTTTCAGGGATGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAG 265213
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| ||||| || ||||||||||| |||||||| | | || | |||| || |||| |
Sbjct 265214 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAGC 265273
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||| ||||||||| ||
Sbjct 265274 ATCGCCCTGTGGATGACCGA 265293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414464221924360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |