Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1424 132 1e-25
seq2363 125 2e-23
seq171 114 3e-20
seq2490 109 1e-18
seq54 102 2e-16
seq2201 98.7 2e-15
seq1673 93.3 1e-13
>seq1424
Length=2309046
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| || || || || || || || || | |||||||| | | ||| | |||||
Sbjct 23454 CAGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATC 23513
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || ||||| || || || |||||||| ||
Sbjct 23514 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATC 23573
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| ||| ||||||||||| || |||||| || | ||||| ||
Sbjct 23574 CTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGT 23633
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|||||| |||| || || | ||| | |||||||||
Sbjct 23634 CTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| || || || || || ||||| || | ||||| || | | ||| | |||||
Sbjct 22998 CAGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 23057
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| ||||| || || || ||||| || | || ||||| || |||||||||||||| ||
Sbjct 23058 CTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATC 23117
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||||||| || |||||||| || |||||| || | ||||| ||
Sbjct 23118 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGT 23177
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| |||| || || | ||| | |||||
Sbjct 23178 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210
>seq2363
Length=646923
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| || || | || |||
Sbjct 187890 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 187831
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || || || ||||||||||||
Sbjct 187830 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCT 187771
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 187770 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 187711
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| || || | ||| | |||||
Sbjct 187710 TTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| || || | || |||
Sbjct 186426 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 186367
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || || || || ||||||||
Sbjct 186366 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 186307
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 186306 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 186247
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| | ||||| || || | ||| | ||||||
Sbjct 186246 TTCCGCGTCAGGGTCTTCACGAAGATCTGCATT 186214
Score = 118 bits (130), Expect = 3e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| || || | || |||
Sbjct 187101 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 187042
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || || || || ||||||||
Sbjct 187041 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 186982
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 186981 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 186922
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || |||| || || | ||| | ||||||
Sbjct 186921 TTACCGGTCAGGGTCTTCACGAAGATCTGCATT 186889
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| || || | || |||
Sbjct 186654 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 186595
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| || | || ||||| || || || || ||||||||
Sbjct 186594 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 186535
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 186534 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 186475
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| || || | ||| | |||||
Sbjct 186474 TTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186443
Score = 111 bits (122), Expect = 4e-19
Identities = 153/213 (72%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||| | || || |||| ||||| |||| || || | || ||
Sbjct 186882 CAGGACCAGGTGCAGGGTG-ACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTC 186824
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| |||||||| || || ||||| || | || ||||| || || || || ||||||||
Sbjct 186823 TTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 186764
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 186763 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 186704
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || |||| || || | ||| | |||||
Sbjct 186703 CTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186671
Score = 107 bits (118), Expect = 5e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| || ||||| || || |||| ||||| |||| || || | || ||||| |||||
Sbjct 187321 GTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTG 187262
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || || ||||| || | || ||||| || || || || |||||||| ||||||||
Sbjct 187261 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 187202
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || ||||||||||| || ||||| || | ||||| ||||| || ||
Sbjct 187201 GGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGT 187142
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| | |||||
Sbjct 187141 CAGGGTCTTCACGAAGATCTGCAT 187118
Score = 107 bits (118), Expect = 5e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| |||| || || | || |||
Sbjct 187662 AGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 187603
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| | | || ||||| || || || || ||||||||
Sbjct 187602 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 187543
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||||| || | ||||| |||
Sbjct 187542 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTC 187483
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| || || | ||| | |||||
Sbjct 187482 TTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187451
>seq171
Length=354554
Score = 114 bits (126), Expect = 3e-20
Identities = 162/226 (72%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| |||| || || ||||| || ||||| | ||||| || | |||
Sbjct 311014 ACGAAGTCTCAACGCAAGATGAAGTGTGGACTCCTTTTGAATGTTGTAGTCAG----AGT 310959
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||| | |||| ||| || || || ||||| |
Sbjct 310958 ACATCCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTTC 310899
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTG-TCTGAGGTTTCCACGTCTA 225670
|||||| | || || || ||| ||| ||| || || |||||| ||| || || |
Sbjct 310898 TTCCTTATTCTGAATTTTGGCCTTTACATTTTCTATCGTTATCTGAGTGTTCAACCTCGA 310839
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| ||| | | |||||||||||| | ||||| ||
Sbjct 310838 GAGTGATGGTCTTCCCCATAAGAGTTTTTATGAAAATCTGCATCTT 310793
>seq2490
Length=16706
Score = 109 bits (120), Expect = 1e-18
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617
|| || || ||| ||||||| ||||| ||||| || ||||||||| | ||||| || ||
Sbjct 5506 TATAATGTAATTGTTACGGCTCATGCATTTGTAATAATTTTCTTTATAGTTATACCCATT 5565
Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677
|| || || || |||||||||||| || |||| |||| || || || || || || ||
Sbjct 5566 ATAATTGGAGGCTTCGGAAATTGACTCATTCCCCTAATAATCGGAGCCCCAGACATAGCA 5625
Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730
|| || | | ||||| || || |||||| | ||||| || || || ||||
Sbjct 5626 TTCCCTCGAATGAACAACATGAGCTTTTGACTTCTACCCCCATCTTTTCTTCT 5678
>seq54
Length=460634
Score = 102 bits (112), Expect = 2e-16
Identities = 138/187 (74%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565
||||| | || ||||| |||||||| | ||| || || | | ||| | |||| || |
Sbjct 180525 CAAGG-GCAGGGTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCA 180467
Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625
|||| || || | ||||| ||||| || ||||| || ||||| || |||||||||||||
Sbjct 180466 GCTGTTTGCCCACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGA 180407
Query 225626 TCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
| ||| |||| ||| |||||||||||| || | || | | ||||| ||||||
Sbjct 180406 T-TTTAGCTTTGACATTTTCGATGGTGTCACTGG-CTGGACCTTGAGTGTGATGGTCTTG 180349
Query 225685 CCCGTCA 225691
|||||||
Sbjct 180348 CCCGTCA 180342
>seq2201
Length=851120
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||| ||||| || ||||| || ||||| | || ||| || | |||||||
Sbjct 771279 AGGACCAGGCACAGAGTAGACTCTTTCTGCCTGTTGTAGTTGGACAAGGTGCGCCCATCT 771220
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||||| |||||||| | | |||| || || | || ||||| ||||||
Sbjct 771219 TCCAGCTGCTTCCTGGCGAAGATCGGCCTCTGTTCATCAGGGGAGATGCCTTCTTTGTCT 771160
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||||| || ||||| || | | ||| |||
Sbjct 771159 TGGATCTTGGCCTTGACGTTCCCGATGGTGTCGCTGGGCTCCACCTCCAGGGCGATGGTC 771100
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| | ||||| || || | ||| | |||||
Sbjct 771099 TTCTCGGTCAAGGTCTTCACGAAGATCTGCAT 771068
>seq1673
Length=2106963
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| ||||| || || || | || ||| ||| |||||||||||||| |||||||
Sbjct 1938558 CACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGAGAATATTTTAGGGATAATG 1938499
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| ||||||||||| |||||||| || || ||| ||||| ||||
Sbjct 1938498 GCAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGTCAA 1938453
Score = 91.5 bits (100), Expect = 4e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530
|||| || |||||||| ||||| || || ||||| || || |||||||| || |||||
Sbjct 1938126 AATACCTGTCCATCAGTGATAGAAATGACGTTTGTTGGAATGTAAGCAGACACGTCACCG 1938185
Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||||||||| | || ||||| || || | || ||||||||||||
Sbjct 1938186 GCTTGTGTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 1938233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192493154528060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |