Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq654 98.7 8e-16
seq1669 86.0 5e-12
>seq654
Length=93227
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| |||||||| || || || |||||||||||||||||||| ||||| || |||
Sbjct 53114 TCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 53055
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| || || ||||| || || | |||||||| | ||||||||
Sbjct 53054 ATTTGGAAGCCGTAGAAACAGCGGGCTTCTGTGATCTGAACTTC 53011
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || ||||| || | || ||||| | |||| || ||
Sbjct 54044 TCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 53985
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||
Sbjct 53984 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGCG 53925
Query 4692 AC 4693
||
Sbjct 53924 AC 53923
>seq1669
Length=5184857
Score = 86.0 bits (94), Expect = 5e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || || || ||||| || || |||||||| || || |||||||| ||||||||||||
Sbjct 4069507 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTCTTTCCTTCTAAAGAAATATTTTCC 4069448
Query 4320 ATAAAATCAAACGGATTAGTTGCGT 4344
||||||||||| ||||| |||||
Sbjct 4069447 ATAAAATCAAAGGGATTTTCTGCGT 4069423
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/130 (75%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
|||||||| || || ||||| || || || || ||||||||||||||||| || || |
Sbjct 4057394 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 4057338
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||| ||||| |||| || || | ||||| || | |||||| || | ||| || |
Sbjct 4057337 TGTGAGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTACCAGTGAGGGAGATCCTTTG 4057278
Query 5041 TTAAATCAAC 5050
||| |||||
Sbjct 4057277 ATAAGTCAAC 4057268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427036640379170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |