Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1989 132 4e-26 >seq1989 Length=1255173 Score = 132 bits (146), Expect = 4e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273 |||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| || || Sbjct 654421 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCA 654362 Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAA 27333 || ||||| || | ||||||||||| ||||| || || ||||| |||| || || Sbjct 654361 AGGCCCATATCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACATAG 654302 Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| || | ||| ||||||||||| || |||||||| Sbjct 654301 AACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAG 654264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369495986611190