Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1424 127 5e-24 seq2363 120 7e-22 seq2201 91.5 3e-13 seq54 86.0 1e-11 seq1767 84.2 5e-11 >seq1424 Length=2309046 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || |||||||| || ||||||||||| | | ||| | ||||| Sbjct 22771 AGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCC 22830 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || |||||||||||||||||||| | | ||| |||||||| || Sbjct 22831 TCCAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 22890 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| || ||||| || || || Sbjct 22891 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGTTCCACTTCCAGGGTGATG 22947 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||| | |||||| Sbjct 22948 GTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 22982 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || || ||||||||||| | | ||| | ||||| Sbjct 23227 AGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCC 23286 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| |||||||||||||| | | ||| |||||||| || Sbjct 23287 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCC 23346 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| ||| || || || || || Sbjct 23347 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTTGGCTCCACCTCTAGGGTGATG 23403 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 23404 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23438 Score = 123 bits (136), Expect = 6e-23 Identities = 159/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || || ||||||||||| | | ||| | |||||| Sbjct 23455 AGGACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCT 23514 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | ||| |||||||| || Sbjct 23515 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 23574 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| || ||||| || || || Sbjct 23575 TGGATCTTGGCCTTTACATTCTCGATGGTGTC---ACTGGGTTCCACTTCCAGGGTGATG 23631 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||||| |||||||| Sbjct 23632 GTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 23669 Score = 118 bits (130), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || |||||||| || |||||||| || | | ||| | ||||| Sbjct 22999 AGGACCAGATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCC 23058 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| |||||||||||||| | | || |||||||| || Sbjct 23059 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGAATACCTTCCTTATCC 23118 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| |||| | | |||| ||| || ||||| || || || Sbjct 23119 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGTTCCACTTCCAGGGTGATG 23175 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 23176 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 23210 >seq2363 Length=646923 Score = 120 bits (132), Expect = 7e-22 Identities = 162/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || || || ||||| || ||||||||||| |||| | || Sbjct 186435 CTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 186376 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | || ||||| || ||||| ||||| ||||| |||||||||||||| | | ||| | Sbjct 186375 CGGCCGTCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGC 186318 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || ||||| |||| | | |||| ||| || || | Sbjct 186317 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCA 186258 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || || || | ||| || ||||||||||||| ||||||| Sbjct 186257 GGGTGATGGTCTTCCGCGTCAGGGTCTTCACGAAGATCTGCATT 186214 Score = 120 bits (132), Expect = 7e-22 Identities = 162/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || || || ||||| || ||||||||||| |||| | || Sbjct 187110 CTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 187051 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | || ||||| || ||||| ||||| ||||| |||||||||||||| | | ||| | Sbjct 187050 CGGCCGTCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGC 186993 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || ||||| |||| | | |||| ||| || || | Sbjct 186992 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCA 186933 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || || || || || || ||||||||||||| ||||||| Sbjct 186932 GGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCATT 186889 Score = 120 bits (132), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | || | || ||| Sbjct 187890 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 187831 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| ||||| |||||||||||||| | | ||| |||||||| | Sbjct 187830 TCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGT 187773 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || ||||| |||| | | |||| ||| || || || || || | Sbjct 187772 CTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGG 187713 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||||||||||| |||||| Sbjct 187712 TCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187679 Score = 118 bits (130), Expect = 2e-21 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || || || ||||| || ||||||||||| |||| | || Sbjct 186663 CTGAGACGGAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 186604 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | || ||||| || ||||| ||||| ||||| |||||||||||||| | | ||| | Sbjct 186603 CGGCCGTCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGC 186546 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || ||||| |||| | | |||| ||| || || | Sbjct 186545 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCA 186486 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || || ||||||||||||| |||||| Sbjct 186485 GGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186443 Score = 118 bits (130), Expect = 2e-21 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | |||||| || || || |||||||| || ||||||||||| |||| | || Sbjct 187671 CTGAGACGGAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTG 187612 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | || ||||| || ||||| ||||| ||||| | |||||||||||| | | ||| | Sbjct 187611 CGGCCGTCTTCCAGCTGCTTT--CCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGC 187554 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 | ||||| || || || || ||||| |||| | | |||| ||| || || | Sbjct 187553 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCA 187494 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || || ||||||||||||| |||||| Sbjct 187493 GGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 187451 Score = 107 bits (118), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | || | || ||| Sbjct 186881 AGGACCAGGTGCAGGGT-GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 186823 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| ||||| |||||||||||||| | | ||| || ||||| | Sbjct 186822 TCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGT 186765 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || ||||| |||| | | |||| ||| || || || || || | Sbjct 186764 CCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGG 186705 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||||||||||| |||||| Sbjct 186704 TCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 186671 Score = 104 bits (114), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GC 151959 || || || ||||| || ||||||||||| |||| | || | || ||||| || || Sbjct 187320 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGC 187261 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| ||||| ||||| |||||||||||||| | | ||| || ||||| || || || | Sbjct 187260 TTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCT 187203 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | ||||| |||| | | |||| ||| || || || || || || || || | Sbjct 187202 TGGCCTTGACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTACCGG 187143 Query 152080 TGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||||||||||| |||||| Sbjct 187142 TCAGGGTCTTCACGAAGATCTGCAT 187118 >seq2201 Length=851120 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 |||||||||||||| || ||||||| | || || || | ||||||||| || ||| Sbjct 771267 AGAGTAGACTCTTTCTGCCTGTTGTAGTTGGACAAGGTGCGCCCATCTTCCAGCTGCTTC 771208 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 | ||||||||| ||||||| | || | ||||| ||||| || ||||| || || Sbjct 771207 CTGGCGAAGATCGGCCTCTGTTCATCAGGGGAGATGCCTTCTTTGTCTTGGATCTTGGCC 771148 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 ||||| || | | | |||| ||| || || || | || || || | || | Sbjct 771147 TTGACGTTCCCGATGGTGTCGCTGGGCTCCACCTCCAGGGCGATGGTCTTCTCGGTCAAG 771088 Query 152085 GTCTTCACGAAGACCTGCAT 152104 ||||||||||||| |||||| Sbjct 771087 GTCTTCACGAAGATCTGCAT 771068 >seq54 Length=460634 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 5/202 (2%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || ||||||||||| || || || || | | ||| | |||| || || ||| Sbjct 180518 AGGGTGGACTCTTTTTGAATATTATAGTCTGAGAGAGTGCAGCCATTCTCCAGCTGTTTG 180459 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || | ||||| || | ||||||||| | | || || ||||| ||||| ||||| | Sbjct 180458 CCCACAAAGATCAGTCGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTTAGCT 180399 Query 152025 TTGACAGTCTCTACGCTGTCTGAACT--CTCTACTTCAAGAGTAATAGTTTTGCCCGTGA 152082 |||||| | || | | |||| ||| || || | || || || || |||||||| | Sbjct 180398 TTGACATTTTCGATGGTGTC---ACTGGCTGGACCTTGAGTGTGATGGTCTTGCCCGTCA 180342 Query 152083 GAGTCTTCACGAAGACCTGCAT 152104 | |||||||| |||| |||||| Sbjct 180341 GGGTCTTCACAAAGATCTGCAT 180320 >seq1767 Length=1785757 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||||||||| ||||| |||||||| || | || || | Sbjct 523798 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAGGTACAT 523857 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| | || ||||| || || |||| || | | ||||||||| Sbjct 523858 CCATCTTCCAATTGTTTGTCAGCAAAGATCAGTCTTCGCTGATCAGGAGGAATTCCTTCC 523917 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | | || || || |||||||| Sbjct 523918 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTAACCGAGGGTTCAACCTCAAGAGTG 523977 Query 152067 ATAGTTTTGCCCG-TGAGAGTCTTCACGAAGACCTGCA 152103 | || || || | | || || |||||||| | || || Sbjct 523978 AAGGTCTTCCCTGTTAAGGGTTTTCACGAAAATCTCCA 524015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153783989510790